prot_H-elongata_contig137132.2613.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137132.2613.1
Unique Nameprot_H-elongata_contig137132.2613.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: D8LD25_ECTSI (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD25_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.120e-34
Identity = 62/81 (76.54%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA+ ATLTF+VGGT++G E ARPLL++MG+K ++CG+AG+GCIAKVCNNL LAISM+GV+EAMSLGSKMG
Sbjct:  140 MVDAPVSGGVPAAANATLTFMVGGTDEGLELARPLLMAMGSKAVHCGDAGAGCIAKVCNNLSLAISMIGVAEAMSLGSKMG 220          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A835YMW9_9STRA (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.270e-28
Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA+  TLTFIVGGT+   ERA PLL +MG++ L CG AG+GC+AK+CNNL LAISMVG++E M+LG K+G
Sbjct:  147 MVDAPVSGGVPAAAAGTLTFIVGGTQPAFERAVPLLNAMGSRALLCGSAGAGCVAKLCNNLALAISMVGIAEGMNLGVKLG 227          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: UPI0001C7C1F0 (probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X2 n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI0001C7C1F0)

HSP 1 Score: 106 bits (264), Expect = 8.090e-26
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA    LTF+VGG+E+    A+PLLLSMG K +YCG AG+G +AK+CNN+ +AISM+GVSEA +LG  +G
Sbjct:  152 MLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLG 232          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A146LCS6_LYGHE (3-hydroxyisobutyrate dehydrogenase n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LCS6_LYGHE)

HSP 1 Score: 105 bits (262), Expect = 1.470e-25
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    2 IDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            +DAPVSGG+  A   TLTF+VGG +QG ++A P+LLSMG  V++CG AGSG IAK CNNL LAISM+GV+EAM++G KMG
Sbjct:  149 VDAPVSGGIIGAENGTLTFMVGGEDQGAKKAEPVLLSMGKNVIHCGPAGSGQIAKNCNNLLLAISMIGVAEAMNIGIKMG 228          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A3B6SQY7_WHEAT (3-hydroxyisobutyrate dehydrogenase n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6SQY7_WHEAT)

HSP 1 Score: 104 bits (260), Expect = 1.730e-25
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA   TLTF+VGG E+    A+PLLL+MG K++YCG AG+G  AK+CNN+ +AISM+GVSEA +LG  +G
Sbjct:  116 MLDAPVSGGVPAAEAGTLTFMVGGLEETYIAAKPLLLAMGKKLIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLG 196          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A453SX19_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SX19_AEGTS)

HSP 1 Score: 103 bits (257), Expect = 3.030e-25
Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA   TLTF+VGG E+    A+PLLL+MG K++YCG AG+G  AK+CNN  +AISM+GVSEA +LG  +G
Sbjct:  167 MLDAPVSGGVPAAEAGTLTFMVGGLEETYIAAKPLLLAMGKKLIYCGGAGNGSAAKICNNTAMAISMLGVSEAFALGQNLG 247          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A3B6RQD2_WHEAT (3-hydroxyisobutyrate dehydrogenase n=11 Tax=Triticinae TaxID=1648030 RepID=A0A3B6RQD2_WHEAT)

HSP 1 Score: 103 bits (257), Expect = 4.300e-25
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA   TLTF+VGG E+    A+PLLL+MG K++YCG AG+G  AK+CNN+ +AISM+GVSEA +LG  +G
Sbjct:  110 MMDAPVSGGVPAAEAGTLTFMVGGLEETYIAAKPLLLAMGKKLIYCGGAGNGSAAKLCNNMAMAISMLGVSEAFALGQNLG 190          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A075AHY5_9TREM (3-hydroxyisobutyrate dehydrogenase n=3 Tax=Opisthorchiidae TaxID=6196 RepID=A0A075AHY5_9TREM)

HSP 1 Score: 104 bits (260), Expect = 5.620e-25
Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    2 IDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            IDAPVSGGVP+A +ATLTF+VGG+E+   RA+P L  MG ++ +CG  G+G  AK+CNN+ LAISMVGVSEAM LG ++G
Sbjct:  200 IDAPVSGGVPSAEQATLTFMVGGSEEACSRAKPFLECMGKRIFHCGPVGAGLAAKICNNMLLAISMVGVSEAMELGRRLG 279          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: B9FQH3_ORYSJ (3-hydroxyisobutyrate dehydrogenase n=3 Tax=Oryza TaxID=4527 RepID=B9FQH3_ORYSJ)

HSP 1 Score: 106 bits (264), Expect = 6.270e-25
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGVPAA    LTF+VGG+E+    A+PLLLSMG K +YCG AG+G +AK+CNN+ +AISM+GVSEA +LG  +G
Sbjct:  608 MLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLG 688          
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Match: A0A6A1WC94_9ROSI (3-hydroxyisobutyrate dehydrogenase n=18 Tax=Fagales TaxID=3502 RepID=A0A6A1WC94_9ROSI)

HSP 1 Score: 103 bits (256), Expect = 6.830e-25
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    1 MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAGSGCIAKVCNNLCLAISMVGVSEAMSLGSKMG 81
            M+DAPVSGGV AA   TLTF+VGG+E+    A+PL LSMG   +YCGEAG+G  AK+CNNL +A+SM+GVSEA++LG  +G
Sbjct:  117 MLDAPVSGGVLAAEAGTLTFMVGGSEKAYLAAKPLFLSMGKNTIYCGEAGNGSAAKICNNLAMAVSMLGVSEALALGQSLG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137132.2613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD25_ECTSI1.120e-3476.543-hydroxyisobutyrate dehydrogenase n=1 Tax=Ectocar... [more]
A0A835YMW9_9STRA2.270e-2867.903-hydroxyisobutyrate dehydrogenase n=1 Tax=Tribone... [more]
UPI0001C7C1F08.090e-2662.96probable 3-hydroxyisobutyrate dehydrogenase, mitoc... [more]
A0A146LCS6_LYGHE1.470e-2565.003-hydroxyisobutyrate dehydrogenase n=2 Tax=Lygus h... [more]
A0A3B6SQY7_WHEAT1.730e-2562.963-hydroxyisobutyrate dehydrogenase n=2 Tax=Triticu... [more]
A0A453SX19_AEGTS3.030e-2562.96Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A3B6RQD2_WHEAT4.300e-2562.963-hydroxyisobutyrate dehydrogenase n=11 Tax=Tritic... [more]
A0A075AHY5_9TREM5.620e-2562.503-hydroxyisobutyrate dehydrogenase n=3 Tax=Opistho... [more]
B9FQH3_ORYSJ6.270e-2562.963-hydroxyisobutyrate dehydrogenase n=3 Tax=Oryza T... [more]
A0A6A1WC94_9ROSI6.830e-2561.733-hydroxyisobutyrate dehydrogenase n=18 Tax=Fagale... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.12340coord: 1..47
e-value: 7.7E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR229813-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATEDcoord: 1..81
IPR0061156-phosphogluconate dehydrogenase, NADP-bindingPFAMPF03446NAD_binding_2coord: 1..47
e-value: 3.5E-12
score: 46.8
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3D1.10.1040.10coord: 48..81
e-value: 1.0E-7
score: 34.3
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..48
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilySUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 48..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137132contigH-elongata_contig137132:469..1144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137132.2613.1mRNA_H-elongata_contig137132.2613.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137132 469..1144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137132.2613.1 ID=prot_H-elongata_contig137132.2613.1|Name=mRNA_H-elongata_contig137132.2613.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MIDAPVSGGVPAASEATLTFIVGGTEQGTERARPLLLSMGAKVLYCGEAG
SGCIAKVCNNLCLAISMVGVSEAMSLGSKMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0061156PGDH_NADP-bd
IPR0133286PGD_dom2
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH-like_C_sf