prot_H-elongata_contig137002.2609.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137002.2609.1
Unique Nameprot_H-elongata_contig137002.2609.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
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BLAST of mRNA_H-elongata_contig137002.2609.1 vs. uniprot
Match: A0A6H5KJD0_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJD0_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.280e-38
Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 0 
Query:    1 MTAEQSRMLDITIEEVMISPLNSSIK-PEGGKSVVWRYMEGAQWRLEPVRGKRVSSFLLESLEWRKKERVDCVMERADSFKCEAVSGKLFVRGVCLLGRPLIWVPLGRDTYDFDREADIQFLIYTV 125
            +T EQ+ ML+ TI EV  SPL S      GG++ VWRY+EGAQWRLEPVRGKRVS F L++L WR+   VD V++RA +F  EA SGKLFVRG  LLGRPLIWV  G +      EA ++FL+YTV
Sbjct:   30 LTPEQASMLETTIAEVQASPLCSDAAVANGGRTAVWRYLEGAQWRLEPVRGKRVSDFFLDTLAWRQDGGVDTVLDRAHTFVDEASSGKLFVRGTSLLGRPLIWVHAGWEDSASGPEASLRFLVYTV 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137002.2609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJD0_9PHAE3.280e-3857.94CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 1..127
e-value: 2.2E-10
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137002contigH-elongata_contig137002:1103..1495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137002.2609.1mRNA_H-elongata_contig137002.2609.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137002 1076..1495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137002.2609.1 ID=prot_H-elongata_contig137002.2609.1|Name=mRNA_H-elongata_contig137002.2609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
MTAEQSRMLDITIEEVMISPLNSSIKPEGGKSVVWRYMEGAQWRLEPVRG
KRVSSFLLESLEWRKKERVDCVMERADSFKCEAVSGKLFVRGVCLLGRPL
IWVPLGRDTYDFDREADIQFLIYTVVSRPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf