prot_H-elongata_contig13690.2600.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13690.2600.1
Unique Nameprot_H-elongata_contig13690.2600.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length384
Homology
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BLAST of mRNA_H-elongata_contig13690.2600.1 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.660e-65
Identity = 109/163 (66.87%), Postives = 125/163 (76.69%), Query Frame = 0 
Query:  220 GRWDMFFHGWWRHQNDQEGGRLPFKGALRSYDSLLKKHYAKMSFFQATALGAVGDVIAQRLERRWNPGQKFEWRRTAHAGALNMVIDGIFTPQWYNAVDRVNSDMTLRAALAKALAASTLYSPFANGIFLAGARVLRYGTRVRFNWDAWRRQLIVCTVRDFEV 382
            GR D F  GW R     +G   PFKGAL SYD+LL++HY KMSF QATALG VGD +AQRLER  NPGQ++E+ RT HAG LNM+IDGIFTP WYN VD VN +MTL  A AKA+A+S  YSPFANG+FLAGARVLRYG + RF W  WRRQL VCT+RDFE+
Sbjct:  197 GRVDGFIDGWRR-----DGDGNPFKGALGSYDALLEEHYLKMSFGQATALGVVGDTVAQRLERWRNPGQRYEFLRTVHAGILNMIIDGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAVWRRQLTVCTIRDFEM 354
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BLAST of mRNA_H-elongata_contig13690.2600.1 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.200e-29
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0 
Query:  244 KGALRSYDSLLKKHYAKMSFFQATALGAVGDVIAQRLERRWNPGQKFEWRRTAHAGALNMVIDGIFTPQWYNAVDRVNSDMTLRAALAKALAASTLYSPFANGIFLAGARVLRYGTRV--RFNWDAWRRQLIVCTVRDFEV 382
            +G  + YD+LL++HY  MSF QAT LG +GD++AQ +E R    + +  +RT H G L M+IDG+ TP +YNA++ ++   T+   L K    + ++ P ANG+FLAG  +L++G  +   FN+ +W+ QL+V T+RD ++
Sbjct:  138 RGLFKKYDNLLRRHYLSMSFAQATVLGVLGDLLAQGIELRLFR-RSYNVKRTMHVGFLTMLIDGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIVKMFNFASWKHQLLVATIRDLQI 277
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BLAST of mRNA_H-elongata_contig13690.2600.1 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.350e-21
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0 
Query:  293 RRTAHAGALNMVIDGIFTPQWYNAVDRVNSDMTLRAALAKALAASTLYSPFANGIFLAGARVLRYGTRVR---FNWDAWRRQLIVCTVRDFEV 382
            RR    G L M IDG+ TP+WY  ++R ++   L   +AK +A+S +Y PFANG+FLAG  VLRYG  V    F+W AWRRQL++ T+RD ++
Sbjct:    8 RRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQL 100
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BLAST of mRNA_H-elongata_contig13690.2600.1 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 4.870e-18
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0 
Query:  324 MTLRAALAKALAASTLYSPFANGIFLAGARVLRYGTRVRFNWDAWRRQLIVCTVRDFEV 382
            MTL  A  KA+A+S  YSPFANG+FLAGARVLRYG + RF W  WRRQL VCT+RDFE+
Sbjct:    1 MTLGLAFVKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAEWRRQLTVCTIRDFEM 59
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13690.2600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JL38_9PHAE4.660e-6566.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UZM4_9STRA4.200e-2940.43Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YIQ1_9STRA7.350e-2148.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LNF3_ECTSI4.870e-1869.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..383
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13690contigH-elongata_contig13690:1084..3882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13690.2600.1mRNA_H-elongata_contig13690.2600.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13690 1009..4430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13690.2600.1 ID=prot_H-elongata_contig13690.2600.1|Name=mRNA_H-elongata_contig13690.2600.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp
MRGVCRLILILLSGANVISLAEEGVIADTSLPLSNDDHLETPLATATAKN
TQSNFDQAAAAISVAASSAATTAAEAVGSFYAHGNGEEETSVRGLGCDAG
SDQVDILASGECRSDESDIDPTDAAYQESDPTIDISAAEEPEDLENSPAN
IAFLSKREDRGVEREKNADDGGLSSTIPVLELSEPLVWEDAVEADGENND
NLFDSFAEAGTDEVLARRGGRWDMFFHGWWRHQNDQEGGRLPFKGALRSY
DSLLKKHYAKMSFFQATALGAVGDVIAQRLERRWNPGQKFEWRRTAHAGA
LNMVIDGIFTPQWYNAVDRVNSDMTLRAALAKALAASTLYSPFANGIFLA
GARVLRYGTRVRFNWDAWRRQLIVCTVRDFEVS*
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