prot_H-elongata_contig136821.2593.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136821.2593.1
Unique Nameprot_H-elongata_contig136821.2593.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig136821.2593.1 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 9.120e-36
Identity = 65/94 (69.15%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    6 NVGCSTGSCVDCCFKAAVPCVAHAKQLERKRLEQELLAAGPSRE---ERRRLAKGVFKEEAIHAIRETATVWCFVDFLCARSNQGAFTALSRTQ 96
              GC+TGSC+DCCFK+A+PC AHAKQL+RKRLE+ELL+AGPS+    E++R  K +FKEE+ HAI +TATVWCF+DFLCA+SNQ AFT+LSRTQ
Sbjct:  392 RAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNIKDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQ 485          
BLAST of mRNA_H-elongata_contig136821.2593.1 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 9.210e-32
Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    3 VILNVGCSTGSCVDCCFKAAVPCVAHAKQLERKRLEQELLAAGPSRE---ERRRLAKGVFKEEAIHAIRETATVWCFVDFLCARSNQGAFTALSRTQ 96
            V +  GC+TGSC+DCCFK+A+PC AHAKQL+RKRLE+ELL+A PS+    E++R  K  FKEE+ HAI +T TVWCF+DF+ A+SNQ AFT+LSRTQ
Sbjct:  791 VRIGGGCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNIKDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQ 887          
BLAST of mRNA_H-elongata_contig136821.2593.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 5.140e-5
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    6 NVGCSTGSCVDCCFKAAVPCVAHAKQLERKRLEQELL 42
             +GCS+ SC +CC K+  PC AHAKQ+ERK  E ELL
Sbjct:  383 KLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELL 419          
BLAST of mRNA_H-elongata_contig136821.2593.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 7.130e-5
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MGVILN-VGCSTGSCVDCCFKAAVPCVAHAKQLERKRLEQELL 42
            +G +L   GCS+ SC +CC K+  PC AHAKQ+ERK  E ELL
Sbjct:  630 LGQLLEGAGCSSESCFECCLKSGKPCEAHAKQVERKHREDELL 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136821.2593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNI0_ECTSI9.120e-3669.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE9.210e-3263.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL83_ECTSI5.140e-559.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE7.130e-555.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136821contigH-elongata_contig136821:553..1565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136821.2593.1mRNA_H-elongata_contig136821.2593.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136821 553..1565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136821.2593.1 ID=prot_H-elongata_contig136821.2593.1|Name=mRNA_H-elongata_contig136821.2593.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MGVILNVGCSTGSCVDCCFKAAVPCVAHAKQLERKRLEQELLAAGPSREE
RRRLAKGVFKEEAIHAIRETATVWCFVDFLCARSNQGAFTALSRTQVS*
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