prot_H-elongata_contig136663.2586.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136663.2586.1
Unique Nameprot_H-elongata_contig136663.2586.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: D8LL90_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL90_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 2.690e-89
Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATGPTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            VSTLSPPV+EV DVDFKY TGPTILK+VNFGLDQ+SR+CIVGPNGAGKTTLLKLLTGAL+ T+GF+RRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQ ARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV
Sbjct:  800 VSTLSPPVLEVMDVDFKYPTGPTILKDVNFGLDQTSRVCIVGPNGAGKTTLLKLLTGALEPTEGFIRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQQARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 948          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A835YHL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHL1_9STRA)

HSP 1 Score: 238 bits (607), Expect = 5.160e-70
Identity = 112/150 (74.67%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            VS L+PP+IEV DV F+Y+T  P I+  V+FG+D  SR+CIVGPNGAGKTTL++LLTG L+ T+G +RRNPR+RAGIYNQHFVDRLPMDIDP +YLRSKF +  DYQSARNLLG+FGLEGHAHTIKMRDLSGGQKARVVFC+L L APH+
Sbjct: 1017 VSRLTPPIIEVHDVAFRYSTNSPIIVGGVDFGIDMDSRVCIVGPNGAGKTTLIRLLTGELEPTEGEIRRNPRLRAGIYNQHFVDRLPMDIDPVAYLRSKFPETTDYQSARNLLGKFGLEGHAHTIKMRDLSGGQKARVVFCDLQLAAPHI 1166          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A7S0XCN1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCN1_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.020e-64
Identity = 97/150 (64.67%), Postives = 123/150 (82.00%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V  ++PP+I+V+DV F+Y    P + KN++FGLD SSR+CIVGPNG+GK+TLLKL+T  L A +G V RNPR+R G+YNQHFVD+LPM+ DP +YLR  F+++  YQ+ RNLLG+FGLEGHAHTI +RDLSGGQKARVVF ELSL APH+
Sbjct:    8 VDLINPPIIQVRDVSFRYKENLPWLFKNLSFGLDMSSRVCIVGPNGSGKSTLLKLITSDLTAPEGMVIRNPRLRLGVYNQHFVDKLPMEEDPVTYLRRLFNEET-YQTCRNLLGKFGLEGHAHTIPIRDLSGGQKARVVFAELSLMAPHI 156          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A7S2JVY3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVY3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.060e-63
Identity = 100/150 (66.67%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V+ LS PV+EV +V F+Y+   P I   ++FG+D  SRIC+VGPNGAGK+TLLKLLTG +DA KG VRRNPR+R GIYNQHFVDRLPM+  P  +LR +F D+ DYQS RN LG++GLEGHAH + MRDLSGGQKARVVF ELSLQ PH+
Sbjct:   50 VAELSRPVMEVNNVHFRYSEKHPVIFDKIDFGIDMDSRICVVGPNGAGKSTLLKLLTGEIDAVKGDVRRNPRLRMGIYNQHFVDRLPMNKTPVQHLRDRFQDE-DYQSVRNRLGKYGLEGHAHEVVMRDLSGGQKARVVFVELSLQRPHI 198          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A7S3XX63_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX63_HETAK)

HSP 1 Score: 214 bits (546), Expect = 1.440e-63
Identity = 104/149 (69.80%), Postives = 120/149 (80.54%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATGPTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V  LSPP+IEV D +F Y  GPTILK++NFG+D  SRIC+VGPNGAGK+TLLKLLTG L  T G ++RN R+R GIYNQHFVDRLPM + P  Y+R + ++Q  YQS RNLLGRFGLEGHAHTI MRDLSGGQKARVVF ELSLQ  H+
Sbjct:  409 VDELSPPIIEVLDCEFHYPNGPTILKDMNFGIDLDSRICVVGPNGAGKSTLLKLLTGELTPTTGELKRNQRLRMGIYNQHFVDRLPMSLSPVDYIRQEHNEQT-YQSTRNLLGRFGLEGHAHTIPMRDLSGGQKARVVFTELSLQHAHI 556          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: W7TNJ5_9STRA (Atp-binding cassette sub-family f member 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNJ5_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.010e-62
Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATGPTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V+ LSPPV+EV+DV F+Y   P I   +NFG+D  SRICIVGPNG+GK+TLLKL+TGAL+ TKG +RRN ++R GIYNQHFVDRLPMD  P  YLRS F D+  YQS RN+LGR+GL+GHAH I +RDLSGGQKARVVF ELSL APH+
Sbjct:  401 VARLSPPVVEVKDVAFRYPNSPWIFDKLNFGMDLDSRICIVGPNGSGKSTLLKLVTGALEPTKGEIRRNSKLRMGIYNQHFVDRLPMDKSPIEYLRSLFPDET-YQSVRNVLGRYGLQGHAHEIPIRDLSGGQKARVVFVELSLMAPHI 548          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A7S4AFI6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFI6_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.480e-61
Identity = 101/150 (67.33%), Postives = 118/150 (78.67%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V  LS PV+EV +V F+Y+   P I + ++FG+D  SRICIVGPNGAGKTTLLKLLTG + ATKG VRRNPR+R GIYNQHFVDRLPM   P  +LR +F+D  DYQ+ RN LGR+GLEGHAH + MRDLSGGQKARVV  ELSLQ PH+
Sbjct:  146 VPELSRPVMEVTNVKFRYSEKHPVIFEKIDFGIDMDSRICIVGPNGAGKTTLLKLLTGEIKATKGDVRRNPRLRMGIYNQHFVDRLPMGKTPVEHLRDRFND-LDYQNCRNRLGRYGLEGHAHEVVMRDLSGGQKARVVLVELSLQMPHI 294          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A4D9D000_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D000_9STRA)

HSP 1 Score: 212 bits (540), Expect = 5.560e-61
Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATGPTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V+ LSPPV+EV+DV F+Y   P I   +NFG+D  SRICIVGPNG+GK+TLLKL+TGAL+ TKG +RRN ++R GIYNQHFVDRLPMD  P  YLRS F D+  YQS RN+LGR+GL+GHAH I +RDLSGGQKARVVF ELSL APH+
Sbjct:  910 VARLSPPVVEVKDVAFRYPNSPWIFDKLNFGMDLDSRICIVGPNGSGKSTLLKLVTGALEPTKGEIRRNSKLRMGIYNQHFVDRLPMDKSPIEYLRSLFPDET-YQSVRNVLGRYGLQGHAHEIPIRDLSGGQKARVVFVELSLMAPHI 1057          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: F0Y307_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y307_AURAN)

HSP 1 Score: 207 bits (528), Expect = 7.760e-61
Identity = 100/150 (66.67%), Postives = 121/150 (80.67%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V+ LSPPV++V D  F+YA   P I  ++NFG+DQ SR+CIVG NG+GKTTLL LLTG L AT+G ++RNPR+R G+YNQHFV+RLPMD  P  YLR  F+D+  YQS RN+LGR+GL+GHAHTI MRDLSGGQKARVV CELSL APH+
Sbjct:  430 VTKLSPPVLQVMDAHFRYAPDLPHIFNDMNFGIDQDSRVCIVGNNGSGKTTLLHLLTGKLAATEGEIKRNPRLRIGVYNQHFVERLPMDESPVDYLRRLFNDET-YQSVRNMLGRYGLQGHAHTIAMRDLSGGQKARVVLCELSLAAPHM 578          
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Match: A0A7S2Y312_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y312_9STRA)

HSP 1 Score: 199 bits (507), Expect = 8.080e-61
Identity = 97/150 (64.67%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    1 VSTLSPPVIEVQDVDFKYATG-PTILKNVNFGLDQSSRICIVGPNGAGKTTLLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFSDQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV 149
            V+ LS PV+EV  V F+Y+   P I + V+FG+D  SR+ IVGPNGAGK+TLLKLLTG +D T+G VRRNPR+R GIYNQHFVD+LPMD  P  +LR K+S++ DYQS RN LG++GLEGHAH + MRDLSGGQKARVVF +LSL+ PH+
Sbjct:  133 VAELSRPVMEVNTVHFRYSPKHPVIFETVDFGIDMDSRVTIVGPNGAGKSTLLKLLTGEVDPTRGDVRRNPRLRMGIYNQHFVDKLPMDKTPVEFLRDKYSNE-DYQSVRNRLGKYGLEGHAHEVAMRDLSGGQKARVVFVDLSLEEPHI 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136663.2586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL90_ECTSI2.690e-8992.62Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A835YHL1_9STRA5.160e-7074.67P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0XCN1_9STRA2.020e-6464.67Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2JVY3_9STRA1.060e-6366.67Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3XX63_HETAK1.440e-6369.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TNJ5_9STRA1.010e-6268.46Atp-binding cassette sub-family f member 1 n=1 Tax... [more]
A0A7S4AFI6_9STRA2.480e-6167.33Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A4D9D000_9STRA5.560e-6168.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
F0Y307_AURAN7.760e-6166.67Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2Y312_9STRA8.080e-6164.67Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 25..148
e-value: 1.0E-17
score: 64.9
NoneNo IPR availableGENE3D3.40.50.300coord: 2..149
e-value: 3.6E-28
score: 100.5
NoneNo IPR availablePANTHERPTHR19211:SF14ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1coord: 3..149
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 3..149
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136663contigH-elongata_contig136663:624..1641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136663.2586.1mRNA_H-elongata_contig136663.2586.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136663 624..1641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136663.2586.1 ID=prot_H-elongata_contig136663.2586.1|Name=mRNA_H-elongata_contig136663.2586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
VSTLSPPVIEVQDVDFKYATGPTILKNVNFGLDQSSRICIVGPNGAGKTT
LLKLLTGALDATKGFVRRNPRMRAGIYNQHFVDRLPMDIDPTSYLRSKFS
DQCDYQSARNLLGRFGLEGHAHTIKMRDLSGGQKARVVFCELSLQAPHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase