prot_H-elongata_contig13649.2574.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig13649.2574.1
Unique Name	prot_H-elongata_contig13649.2574.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	137

Homology

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A6H5LPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 9.690e-49
Identity = 86/102 (84.31%), Postives = 94/102 (92.16%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLAG 136
            RFAQNEFEHGSVERGR VFEGLM+SYPKRLDLWNVYLDKEVKAG++RAARN+ ERL  +D NAKRMKGVFKKYLQFEM+HGD+AGV AVK KA +YVASLAG
Sbjct: 2297 RFAQNEFEHGSVERGRSVFEGLMASYPKRLDLWNVYLDKEVKAGDLRAARNLLERLSGMDFNAKRMKGVFKKYLQFEMEHGDEAGVNAVKAKATQYVASLAG 2398

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: D7FRR9_ECTSI (rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.160e-47
Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLAG 136
            RFAQNEFEHGSVERGR VFEGLM+SYPKRLDLWNVY DKEVKAG++RAARN+ ERL  +D NAKRMKGVFKKYLQFEM+HGD+A V AVK KA EYVASLAG
Sbjct: 2243 RFAQNEFEHGSVERGRSVFEGLMASYPKRLDLWNVYFDKEVKAGDLRAARNLLERLTGMDFNAKRMKGVFKKYLQFEMEHGDEARVNAVKAKATEYVASLAG 2344

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A7S3UYU4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYU4_HETAK)

HSP 1 Score: 131 bits (329), Expect = 5.390e-33
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLA 135
            RFA  E++HGS ERGR + EGL+ SYPKRLDLWN Y+D+E+K G +  AR + ER+I L L+  +MK VFKKYL+FEM+HGD+   E VK KA+EYV SLA
Sbjct:  496 RFAHLEYDHGSAERGRTILEGLVGSYPKRLDLWNQYVDREIKQGNLPEARAVFERMISLSLSPHKMKNVFKKYLRFEMEHGDEEKAEEVKAKAQEYVRSLA 596

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A7S2H4N6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H4N6_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.210e-32
Identity = 64/105 (60.95%), Postives = 78/105 (74.29%), Query Frame = 0

Query:   30 IFFSFRFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASL 134
            ++   + AQ EF  GSVERGR VFEGL+SSYPKR+DLWNVY+DKEVKAG + AARN+ ERL+ L L+ K++K  FKK+L FE  HGD   +  VK KAKEYV  L
Sbjct:  745 VYVVSQLAQFEFAIGSVERGRTVFEGLLSSYPKRVDLWNVYVDKEVKAGNIPAARNLFERLVTLKLSKKQVKASFKKWLSFETRHGDDEKLNVVKSKAKEYVQRL 849

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: W7TCI2_9STRA (Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCI2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.680e-31
Identity = 59/98 (60.20%), Postives = 79/98 (80.61%), Query Frame = 0

Query:   36 FAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVAS 133
            +AQ EFEHGSV+RGR +F+GL+SS+PKRLDLWN+Y+DKEVK+G + AAR + +R+  L L+A++MK V KKY+Q E+ HGD   VE VK KA+E+V S
Sbjct: 2144 YAQAEFEHGSVDRGRTIFDGLLSSFPKRLDLWNMYVDKEVKSGHIEAARRLLDRMCTLRLSAQKMKNVMKKYVQLELVHGDIQSVERVKSKAREFVES 2241

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: H3GCA3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCA3_PHYRM)

HSP 1 Score: 120 bits (301), Expect = 6.060e-29
Identity = 54/101 (53.47%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLA 135
            ++ Q  +EHG +++ R +FEG++++YPKR+DLWNVYLDKE+K G+V   R + ERL+ ++ +AK+MK +FKKYLQFE D GD   VE VK  AK++VAS A
Sbjct: 1838 KYGQLLYEHGELDKARTIFEGILANYPKRMDLWNVYLDKEIKFGDVALVRALFERLLAMEFSAKKMKFLFKKYLQFEQDQGDDEHVEHVKQLAKDFVASAA 1938

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A7S3MHV7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHV7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.660e-29
Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLA 135
            ++A +EF+ GS +R R+VFE L+++YPKR DLW++Y+DKEVK G +  AR + ER+I     A+ MK VFKKYL FE+ HG +   E VK KA+EYV+S+A
Sbjct:   76 KYAMSEFDFGSPDRARVVFEDLLTTYPKRTDLWHLYVDKEVKLGNIIQARQLFERMIASKTKAQNMKTVFKKYLAFEISHGTEETQELVKQKAREYVSSIA 176

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A2R6XEU3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XEU3_MARPO)

HSP 1 Score: 119 bits (299), Expect = 1.130e-28
Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 0

Query:   40 EFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLAG 136
            EF+HGS ERGR +FEG++ +YPKRLDLW+VYLD+E++ G+V   R + ER + L+L  K+MK +FK+YL FE  HGD+A VE VK KA EYV +  G
Sbjct: 1889 EFKHGSPERGRAIFEGIVRNYPKRLDLWSVYLDQEIRVGDVDIVRALFERAVLLELQPKKMKTLFKRYLDFEKTHGDEARVEYVKTKAMEYVENKLG 1985

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: A0A0W8DSU2_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DSU2_PHYNI)

HSP 1 Score: 119 bits (297), Expect = 2.060e-28
Identity = 54/101 (53.47%), Postives = 76/101 (75.25%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLA 135
            ++ Q  +E G +++ R +FEG++++YPKR+DLWNVYLDKE+K G+V   R + ERL+ +D +AK+MK +FKKYLQFE D GD   VE VK  AK++VAS A
Sbjct: 1255 KYGQLLYEQGELDKARTIFEGILANYPKRMDLWNVYLDKEIKFGDVALVRALFERLLAMDFSAKKMKFLFKKYLQFEQDQGDDEHVEHVKQLAKDFVASAA 1355

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BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Match: W2QFF6_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2QFF6_PHYPN)

HSP 1 Score: 119 bits (297), Expect = 2.100e-28
Identity = 54/101 (53.47%), Postives = 76/101 (75.25%), Query Frame = 0

Query:   35 RFAQNEFEHGSVERGRLVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRMKGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLA 135
            ++ Q  +E G +++ R +FEG++++YPKR+DLWNVYLDKE+K G+V   R + ERL+ +D +AK+MK +FKKYLQFE D GD   VE VK  AK++VAS A
Sbjct: 1832 KYGQLLYEQGELDKARTIFEGILANYPKRMDLWNVYLDKEIKFGDVALVRALFERLLAMDFSAKKMKFLFKKYLQFEQDQGDDEHVEHVKQLAKDFVASAA 1932

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot

BLAST of mRNA_H-elongata_contig13649.2574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LPP1_9PHAE	9.690e-49	84.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRR9_ECTSI	1.160e-47	83.33	rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus si...	[more]
A0A7S3UYU4_HETAK	5.390e-33	60.40	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2H4N6_9STRA	6.210e-32	60.95	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
W7TCI2_9STRA	1.680e-31	60.20	Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidace...	[more]
H3GCA3_PHYRM	6.060e-29	53.47	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A7S3MHV7_9STRA	6.660e-29	52.48	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A2R6XEU3_MARPO	1.130e-28	56.70	Uncharacterized protein n=2 Tax=Marchantia polymor...	[more]
A0A0W8DSU2_PHYNI	2.060e-28	53.47	Uncharacterized protein n=1 Tax=Phytophthora nicot...	[more]
W2QFF6_PHYPN	2.100e-28	53.47	Uncharacterized protein n=13 Tax=Phytophthora TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 78..113 e-value: 15.0 score: 14.1 coord: 44..76 e-value: 0.19 score: 20.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 17..135 e-value: 4.4E-21 score: 77.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 23..131
None	No IPR available	PANTHER	PTHR23270	PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5	coord: 32..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig13649	contig	H-elongata_contig13649:6909..8075 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig13649.2574.1	mRNA_H-elongata_contig13649.2574.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig13649 6909..8075 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig13649.2574.1 ID=prot_H-elongata_contig13649.2574.1|Name=mRNA_H-elongata_contig13649.2574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
FLLFNGTKILSSPLLDNSFTHSNPPSSWSIFFSFRFAQNEFEHGSVERGR
LVFEGLMSSYPKRLDLWNVYLDKEVKAGEVRAARNIHERLIHLDLNAKRM
KGVFKKYLQFEMDHGDQAGVEAVKVKAKEYVASLAG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003107	HAT
IPR011990	TPR-like_helical_dom_sf