prot_H-elongata_contig136383.2566.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136383.2566.1
Unique Nameprot_H-elongata_contig136383.2566.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: D7G5C4_ECTSI (Nascent polypeptide-associated complex subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.560e-18
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKLTTTLKRIGVTNIPAIEEVNMF NDGEVIHFVGPK
Sbjct:   36 SDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPK 75          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A7S2WUD9_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUD9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.070e-13
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    2 AADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            ++DDKKL+TTLK++GVTNIPAIEEVN+FTN G VIHF  PK
Sbjct:   66 SSDDKKLSTTLKKLGVTNIPAIEEVNLFTNGGNVIHFQNPK 106          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A7S2GVT8_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVT8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.140e-13
Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL +TLK++GVTNIPAIEEVN+FTNDG+V+HF  PK
Sbjct:   64 SDDKKLGSTLKKLGVTNIPAIEEVNLFTNDGKVVHFSNPK 103          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A836CCH6_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH6_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.110e-13
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    2 AADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +ADDKKL T LK++G TNIPAIEEVNMF ++GEVIHFV PK
Sbjct:   48 SADDKKLMTALKKLGTTNIPAIEEVNMFQDNGEVIHFVNPK 88          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A6V1P391_HETAK (Nascent polypeptide-associated complex subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P391_HETAK)

HSP 1 Score: 68.2 bits (165), Expect = 4.270e-13
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL TTLK++GVTNIPAIEEVN+F  +GEVIHFV PK
Sbjct:   45 SDDKKLGTTLKKLGVTNIPAIEEVNLFKQNGEVIHFVNPK 84          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A8J2WZC4_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZC4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.860e-13
Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL +TLK++GVTNIPAIEEVN+FT+DG+VIHF  PK
Sbjct:   42 SDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVIHFSNPK 81          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: F0YK21_AURAN (Nascent polypeptide-associated complex subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK21_AURAN)

HSP 1 Score: 67.0 bits (162), Expect = 9.430e-13
Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL +TLK++GVTNIPAIEEVN+FT+DG+V+HF  PK
Sbjct:   33 SDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVVHFSNPK 72          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: F0YGQ0_AURAN (Nascent polypeptide-associated complex subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ0_AURAN)

HSP 1 Score: 65.9 bits (159), Expect = 3.560e-12
Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL +TLK++GVTNIPAIEEVN+FT DG+V+HF  PK
Sbjct:   42 SDDKKLGSTLKKLGVTNIPAIEEVNLFTADGKVVHFSNPK 81          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A7S2XW83_9STRA (Nascent polypeptide-associated complex subunit beta n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW83_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.690e-12
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    3 ADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            +DDKKL TTLK++GVTNIPAIEEVN+F  +GEVIHF  PK
Sbjct:   46 SDDKKLGTTLKKLGVTNIPAIEEVNLFKENGEVIHFSNPK 85          
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Match: A0A6U1BIA3_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1BIA3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.200e-12
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    2 AADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPK 42
            A DD KL+TTLK++G TNIP IEEVN+F  DG+VIHFV PK
Sbjct:   46 ARDDAKLSTTLKKLGATNIPGIEEVNLFKEDGKVIHFVNPK 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136383.2566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C4_ECTSI4.560e-1895.00Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2WUD9_9STRA2.070e-1375.61Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2GVT8_9STRA3.140e-1375.00Nascent polypeptide-associated complex subunit bet... [more]
A0A836CCH6_9STRA4.110e-1375.61Nascent polypeptide-associated complex subunit bet... [more]
A0A6V1P391_HETAK4.270e-1377.50Nascent polypeptide-associated complex subunit bet... [more]
A0A8J2WZC4_9STRA7.860e-1375.00Nascent polypeptide-associated complex subunit bet... [more]
F0YK21_AURAN9.430e-1372.50Nascent polypeptide-associated complex subunit bet... [more]
F0YGQ0_AURAN3.560e-1272.50Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2XW83_9STRA3.690e-1275.00Nascent polypeptide-associated complex subunit bet... [more]
A0A6U1BIA3_9STRA7.200e-1270.73Nascent polypeptide-associated complex subunit bet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038187NAC A/B domain superfamilyGENE3D2.20.70.30coord: 17..45
e-value: 6.8E-11
score: 43.6
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 5..42
e-value: 1.9E-12
score: 46.9
IPR002715Nascent polypeptide-associated complex NAC domainPROSITEPS51151NAC_ABcoord: 2..46
score: 11.168
IPR039370Transcription factor BTF3PANTHERPTHR10351TRANSCRIPTION FACTOR BTF3 FAMILY MEMBERcoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136383contigH-elongata_contig136383:107..247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136383.2566.1mRNA_H-elongata_contig136383.2566.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136383 107..247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136383.2566.1 ID=prot_H-elongata_contig136383.2566.1|Name=mRNA_H-elongata_contig136383.2566.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
MAADDKKLTTTLKRIGVTNIPAIEEVNMFTNDGEVIHFVGPKGKGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038187NAC_A/B_dom_sf
IPR002715Nas_poly-pep-assoc_cplx_dom
IPR039370BTF3