prot_H-elongata_contig136106.2554.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136106.2554.1
Unique Nameprot_H-elongata_contig136106.2554.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: D7FSY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.620e-20
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQ-VTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQV 49
            VRVWELQRGYG Q +T VPKAQ+NHDAPVLCTDFS+DGT +FSGGASKQV
Sbjct:   44 VRVWELQRGYGTQPITAVPKAQINHDAPVLCTDFSADGTKVFSGGASKQV 93          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: B9SMV1_RICCO (Plant poly(A)+ RNA export protein, putative n=5 Tax=Euphorbiaceae TaxID=3977 RepID=B9SMV1_RICCO)

HSP 1 Score: 65.1 bits (157), Expect = 7.280e-11
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVRAIPII 55
            VR WE+ R  G  +  VPK Q+ HD PVLC+ +  DGTT+FSGG  KQV+  P++
Sbjct:   49 VRCWEITRN-GTTIGSVPKTQITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL 102          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: K3XAP5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAP5_GLOUD)

HSP 1 Score: 63.5 bits (153), Expect = 2.590e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+Q+  G Q   VPKAQ++HD PVLCT FS DG+T+FSG   K  +
Sbjct:   54 VRCWEVQQ-QGTQFNAVPKAQISHDGPVLCTAFSGDGSTVFSGSCDKTAK 102          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: A0A8K1C843_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C843_PYTOL)

HSP 1 Score: 63.2 bits (152), Expect = 3.940e-10
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+Q+  G     VPKAQ+ HD PVLCT FS DGTT+FSG   K  +
Sbjct:  427 VRCWEVQQ-QGTAFNAVPKAQITHDGPVLCTSFSGDGTTVFSGSCDKTAK 475          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: F0WRC9_9STRA (WD domaincontaining protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WRC9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.830e-10
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR W++Q   G Q   VPKAQ+ H+ PVLCT FS DGTT+FSG   K  +
Sbjct:   52 VRCWDVQHA-GTQFNAVPKAQITHEGPVLCTSFSGDGTTVFSGSCDKTAK 100          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: A0A2D4CJX3_PYTIN (WD domain-containing protein, putative (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJX3_PYTIN)

HSP 1 Score: 61.6 bits (148), Expect = 1.220e-9
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+Q+  G Q   VPKAQ++H APVLCT FS DG+++FSG   K  +
Sbjct:   40 VRCWEVQQS-GTQFNAVPKAQISHSAPVLCTAFSGDGSSVFSGSCDKTAK 88          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: A0A162B2F9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162B2F9_DAUCS)

HSP 1 Score: 61.6 bits (148), Expect = 1.260e-9
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+ R  GN +  VPKAQ++H+ P LC+ +  DGTT+F+GG  KQV+
Sbjct:   45 VRCWEVMRN-GNNLGTVPKAQISHEQPALCSTWKDDGTTVFTGGCDKQVK 93          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: A0A6A4ZPT9_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZPT9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.760e-9
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASK 47
            VR WE+Q   G Q   V +AQ +H APVLCT FS+DGTT+FSG   K
Sbjct:   53 VRCWEVQH-QGTQFQAVARAQFSHKAPVLCTAFSADGTTVFSGSCDK 98          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: A0A5D6XL84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL84_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.350e-9
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+Q+  G Q   VPKAQ+ HD PVLCT FS+DG+ +FSG   K  +
Sbjct:   52 VRCWEVQQ-QGAQFNAVPKAQIAHDGPVLCTAFSADGSAVFSGSCDKTAK 100          
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Match: H3G7H3_PHYRM (Uncharacterized protein n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3G7H3_PHYRM)

HSP 1 Score: 59.7 bits (143), Expect = 6.120e-9
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR 50
            VR WE+Q+  G Q   V KAQ++HD PVLCT FS DG+T+FSG   K  +
Sbjct:   49 VRCWEVQQ-QGAQFNAVAKAQISHDGPVLCTAFSGDGSTVFSGSCDKTAK 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136106.2554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY0_ECTSI1.620e-2084.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B9SMV1_RICCO7.280e-1150.91Plant poly(A)+ RNA export protein, putative n=5 Ta... [more]
K3XAP5_GLOUD2.590e-1056.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C843_PYTOL3.940e-1056.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WRC9_9STRA4.830e-1054.00WD domaincontaining protein putative n=2 Tax=Albug... [more]
A0A2D4CJX3_PYTIN1.220e-954.00WD domain-containing protein, putative (Fragment) ... [more]
A0A162B2F9_DAUCS1.260e-952.00Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A6A4ZPT9_9STRA3.760e-957.45Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A5D6XL84_9STRA4.350e-954.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3G7H3_PHYRM6.120e-954.00Uncharacterized protein n=30 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..58
e-value: 3.0E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 1..55
NoneNo IPR availablePANTHERPTHR10971:SF27coord: 1..55
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..60
score: 8.94
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136106contigH-elongata_contig136106:471..653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136106.2554.1mRNA_H-elongata_contig136106.2554.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136106 471..653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136106.2554.1 ID=prot_H-elongata_contig136106.2554.1|Name=mRNA_H-elongata_contig136106.2554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
VRVWELQRGYGNQVTGVPKAQMNHDAPVLCTDFSSDGTTIFSGGASKQVR
AIPIIERSAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf