prot_H-elongata_contig13605.2552.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13605.2552.1
Unique Nameprot_H-elongata_contig13605.2552.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length455
Homology
BLAST of mRNA_H-elongata_contig13605.2552.1 vs. uniprot
Match: A0A6H5K1H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H2_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.190e-71
Identity = 223/588 (37.93%), Postives = 274/588 (46.60%), Query Frame = 0
Query:    1 SRKDLRSLTAGTEVEEKNTLAALHNIEACLEK----AVVSRGDSCVDTERTGKVKYMMGARRHAS---------------------GAVVTSGAPSAFAAAAVAALPPKLAWALGLSAAGNGNGRDDSSSCLPSETGGRGGXXXXXXXXXXXXXGRSWY--PNVDIVRQARASLEFRLARREHHKKLQHAAHAFT--FTSGSFTTDAASAGDATVPAVDRLPDNGTPQHS----LPDEKINSPPPLVMLSRAAAV---------------------------------------------STGLSMWLANDGTERRGLKTSATAVVDP------------LAADMSSAARAL------------------------VDLHAARIHELKPLMTRAIRRRRFALRRHWEELGDEYARVRNVWQVDAARWEGKMEEEEAKEALASGTTGTGGNIGIGGGGEEGDGS-------------------RSERRGGGRRLSDIVRSDYEEAEVVKKFEDRHKEEERIRNGAGNVPSMFTAMERRQLPEYVDISNARGTKDGLPARCAGLPRTEACPVGCNCAAAVEVERKRLNLW 455
            SRK+LR LT+GTEVEE+ TLAAL ++EACLE+    A  +     V+ E+   V     ++  +S                     G  +T  A       AVAALP +LA ALGL A G+G   +   S  P+  GG G              GR+ +  P+VD+VRQARAS+EFR+ARR H  +L++AA A       G+       A  A   AV    ++G P  +    LP     SPP +V   RA A                                               +G  + +A    E +    +A A +D             L+ + ++AA A                           +HAAR+ ELKP+MTRAIRRR+  LRR WE+LGDEYA + N W VD  RWE KMEEE                                                RSERR GGRRLSD+VRSDYEEAEVVKKFED+HKEEERIR GA  VPSM TA+ERRQLPEY D  N+RGT D LPARC GLP   ACP GCNC AAVE ERK LNLW
Sbjct: 1526 SRKELRRLTSGTEVEERRTLAALRDLEACLEEGRIAAATAASTPAVEAEKALVVPDASSSQAKSSREANNPGTEEIIPXXXXXXXXGGTLTP-AVXXXXXTAVAALPAELATALGL-AEGDGKRGEGGGSNQPAVAGGGG--------VGLDHEGRNGFSPPHVDLVRQARASVEFRVARRRHKGELENAAAAAATLVVGGTPGPPVGKAAGAAPVAVTARSEHGGPDEASAKGLPGPS-QSPPAVVATERAGASPGSKAAXXXXXARKGPSGLRTRVPTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQARAVAAQAELDERLLGLPRNTSPSLSGEAAAAAAAAQASALGTXXXXXXXXXXXXXXXXXXXIHAARLRELKPVMTRAIRRRQLELRRRWEKLGDEYAGLHNAWHVDMLRWEEKMEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRSERR-GGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDALPARCRGLPADAACPAGCNCPAAVEAERKLLNLW 2101          
BLAST of mRNA_H-elongata_contig13605.2552.1 vs. uniprot
Match: D8LGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU8_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 3.570e-65
Identity = 202/509 (39.69%), Postives = 244/509 (47.94%), Query Frame = 0
Query:    1 SRKDLRSLTAGTEVEEKNTLAALHNIEACLEK----AVVSRGDSCVDTERTGKVKYMMGARRHASGAVVTSGAPSAFAAAA--------------------VAALPPKLAWALGLSAAGNGNGRDDSSSCLPSETGGRGGXXXXXXXXXXXXXGRSWY--PNVDIVRQARASLEFRLARREHHKKLQHAAHAFTFTSGSFTTDAASAGDATVPAVDRLPDNGTP--QHSLPDEKI--------NSPPPLVMLSRAAAVSTGLSMWLANDGTERRGLKTSATAVVDPLAADMSSAARALVDLHAARIHELKPLMTRAIRRRRFALRRHWEELGDEYARVRNVWQVDAARWEGKMEEEEAKEALASGTTGTGGNIGIGGGGE------------------EGDGSRSERRGGGRRLSDIVRSDYEEAEVVKKFEDRHKEEERIRNGAGNVPSMFTAMERRQLPEYVDISNARGTKDGLPARCAGLPRTEACPVGCNCAAAVEVERKRLNLW 455
            SRK+LR LT+GTEVEE+ TLAAL ++EACLE+    A  +      + E+   V     ++  +SG     G     A+ +                     AALP +LA ALGL A G+G   +   S  P+  GG                GR+ +  P+VD+VRQARAS+EFR+ARR +  +L++AA                                    +H  PDE           SPP +V   RA A S G S   A     R+G     T V  P  A +S   RA VD     + +    +  A   R   LRR WE+LGD+YA + N W VD  RWE KMEE                                            G   RSERR GGRRLSD+VRSDYEEAEVVKKFED+HKEEERIR GA  VPSM TA+ERRQLPEY D  N+RGT DGLPARC GLP   ACP GCNC AAVE ERK  NLW
Sbjct: 1391 SRKELRRLTSGTEVEERRTLAALRDLEACLEEGRIAAATAASTPVAEAEKAPVVADASASQAKSSGEANNPGTEKTIASRSSANNDGGTLTPAVAAXXXXXXAALPAELATALGL-AEGDGKRSEGGGSDQPAVAGG--------DRVGVDHEGRNGFSPPHVDLVRQARASVEFRVARRRYKGELENAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEHGGPDESSAKGLPGPSQSPPGVVTTERAGA-SPG-SKAAAASAPARKGPSGLRTRV--PTGAPVSHLFRARVDAAPGGVPKSGRDVAIARVMRENQLRRRWEKLGDQYAGLHNAWHVDMLRWEEKMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGASLRSERR-GGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLW 1885          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13605.2552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1H2_9PHAE1.190e-7137.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGU8_ECTSI3.570e-6539.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 59..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13605contigH-elongata_contig13605:6561..8273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13605.2552.1mRNA_H-elongata_contig13605.2552.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13605 6561..8273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13605.2552.1 ID=prot_H-elongata_contig13605.2552.1|Name=mRNA_H-elongata_contig13605.2552.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=455bp
SRKDLRSLTAGTEVEEKNTLAALHNIEACLEKAVVSRGDSCVDTERTGKV
KYMMGARRHASGAVVTSGAPSAFAAAAVAALPPKLAWALGLSAAGNGNGR
DDSSSCLPSETGGRGGDSGSSSGSGPGPGGRSWYPNVDIVRQARASLEFR
LARREHHKKLQHAAHAFTFTSGSFTTDAASAGDATVPAVDRLPDNGTPQH
SLPDEKINSPPPLVMLSRAAAVSTGLSMWLANDGTERRGLKTSATAVVDP
LAADMSSAARALVDLHAARIHELKPLMTRAIRRRRFALRRHWEELGDEYA
RVRNVWQVDAARWEGKMEEEEAKEALASGTTGTGGNIGIGGGGEEGDGSR
SERRGGGRRLSDIVRSDYEEAEVVKKFEDRHKEEERIRNGAGNVPSMFTA
MERRQLPEYVDISNARGTKDGLPARCAGLPRTEACPVGCNCAAAVEVERK
RLNLW
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