prot_H-elongata_contig136022.2546.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136022.2546.1
Unique Nameprot_H-elongata_contig136022.2546.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: D8LGC6_ECTSI (Eukaryotic translation initiation factor 2B gamma subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC6_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 7.790e-19
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAV 52
            +QAV+LACEDG+RLYPLTQD   PAPLLPVLN PLLHYQLELLEKAGYT A+
Sbjct:    7 LQAVILACEDGKRLYPLTQD--VPAPLLPVLNNPLLHYQLELLEKAGYTEAL 56          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A835YVP1_9STRA (Eukaryotic translation initiation factor 2B gamma subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.960e-13
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAV 52
            +QAV+LAC DG RLYPLT+  ECP  LLPVLN+P+L YQL+LLE+AG+  A+
Sbjct:    6 LQAVILACGDGARLYPLTE--ECPLSLLPVLNRPILQYQLDLLEEAGFHRAL 55          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A2P4P8Y6_RHIID (Nucleotide-diphospho-sugar transferase n=6 Tax=Rhizophagus TaxID=1129544 RepID=A0A2P4P8Y6_RHIID)

HSP 1 Score: 60.1 bits (144), Expect = 6.110e-9
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 QAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAV 52
            QA+VL C  G RLYPLT+D   P  LLP+ NKP+LHY L+ LE+AG T  +
Sbjct:  103 QAIVL-CGYGNRLYPLTEDNNIPKALLPLANKPMLHYVLDWLERAGITDVI 152          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A7S3F2F4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F2F4_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 9.760e-8
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MQAVVLAC-EDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAG 47
            MQAV+LA   DG  LYPLT+    P  LLPV N+PLL YQLELLE+AG
Sbjct:    1 MQAVILASGNDGDNLYPLTE--LLPTALLPVANRPLLWYQLELLERAG 46          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A6G0WUG6_9STRA (NTP_transferase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUG6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.290e-7
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    2 QAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYT 49
            QAV+LA   G RLYPLT+  E P PLLPV  KPLL+YQL LLEK+ ++
Sbjct:    5 QAVILAGGSGVRLYPLTE--ETPKPLLPVNGKPLLYYQLALLEKSDFS 50          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A2U3CIG6_HEIAB (NTP_transferase domain-containing protein n=1 Tax=Heimdallarchaeota archaeon (strain B3-JM-08) TaxID=2012493 RepID=A0A2U3CIG6_HEIAB)

HSP 1 Score: 55.8 bits (133), Expect = 1.870e-7
Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    3 AVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAVGSILNPYRTRSVFY 66
            AVVLA   G RL PLTQ+   P PL+PV NKP++ Y LELL  AG TG +  I    R   + Y
Sbjct:    6 AVVLAGGIGSRLRPLTQN--IPKPLVPVANKPMIDYNLELLRNAGITGKIAIITRYMREEIIQY 67          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A485L011_9STRA (Aste57867_13374 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L011_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.440e-7
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    2 QAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYT 49
            QAV+LA   G RLYPLT+  E P PLL V NKPLL+YQL LLE +G++
Sbjct:    5 QAVILAGGSGVRLYPLTE--ETPKPLLLVNNKPLLYYQLALLENSGFS 50          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: A0A7C3Q4P9_9BACT (NDP-sugar synthase (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C3Q4P9_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 2.950e-7
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAV 52
            M+A++LA   G RL PLT +   P PLLPV N+PL+HY L LL+K G T  V
Sbjct:    1 MKAMILAAGLGTRLRPLTNN--LPKPLLPVANRPLIHYNLLLLKKYGITDVV 50          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: UPI00068E5B56 (NDP-sugar synthase n=1 Tax=Metabacillus TaxID=2675233 RepID=UPI00068E5B56)

HSP 1 Score: 54.7 bits (130), Expect = 4.710e-7
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAVGSI 55
            M+AV+LA  +G RL PLT    CP PL+P+LNKP+L Y LELL++ G    + ++
Sbjct:    1 MKAVILAGGEGCRLRPLTN--HCPKPLVPILNKPVLEYSLELLKRHGIDDVIMTV 53          
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Match: UPI00199BF69D (NDP-sugar synthase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI00199BF69D)

HSP 1 Score: 54.7 bits (130), Expect = 4.740e-7
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTGAV 52
            MQA+++A   G RL PLT D   P P++P+ N+PLL+YQ+ELL++ G T  +
Sbjct:    1 MQAIIIAGGQGTRLRPLTYD--LPKPIIPIFNRPLLYYQIELLKRHGITDII 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136022.2546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC6_ECTSI7.790e-1982.69Eukaryotic translation initiation factor 2B gamma ... [more]
A0A835YVP1_9STRA6.960e-1365.38Eukaryotic translation initiation factor 2B gamma ... [more]
A0A2P4P8Y6_RHIID6.110e-956.86Nucleotide-diphospho-sugar transferase n=6 Tax=Rhi... [more]
A0A7S3F2F4_9EUKA9.760e-864.58Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A6G0WUG6_9STRA1.290e-762.50NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A2U3CIG6_HEIAB1.870e-750.00NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A485L011_9STRA2.440e-762.50Aste57867_13374 protein n=1 Tax=Aphanomyces stella... [more]
A0A7C3Q4P9_9BACT2.950e-753.85NDP-sugar synthase (Fragment) n=1 Tax=Nitrospirae ... [more]
UPI00068E5B564.710e-749.09NDP-sugar synthase n=1 Tax=Metabacillus TaxID=2675... [more]
UPI00199BF69D4.740e-748.08NDP-sugar synthase n=1 Tax=Candidatus Sericytochro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..60
e-value: 1.3E-12
score: 49.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..49
IPR005835Nucleotidyl transferase domainPFAMPF00483NTP_transferasecoord: 3..63
e-value: 1.4E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR45989FAMILY NOT NAMEDcoord: 2..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136022contigH-elongata_contig136022:1247..1447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136022.2546.1mRNA_H-elongata_contig136022.2546.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136022 1247..1447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136022.2546.1 ID=prot_H-elongata_contig136022.2546.1|Name=mRNA_H-elongata_contig136022.2546.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MQAVVLACEDGRRLYPLTQDQECPAPLLPVLNKPLLHYQLELLEKAGYTG
AVGSILNPYRTRSVFYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR005835NTP_transferase_dom