prot_H-elongata_contig136009.2545.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136009.2545.1
Unique Nameprot_H-elongata_contig136009.2545.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
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BLAST of mRNA_H-elongata_contig136009.2545.1 vs. uniprot
Match: A0A6H5JVI6_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI6_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.890e-16
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVS 39
            MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAV+
Sbjct:  328 MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVA 366
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BLAST of mRNA_H-elongata_contig136009.2545.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.890e-16
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVS 39
            MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAV+
Sbjct: 1114 MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVA 1152
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136009.2545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVI6_9PHAE2.890e-1697.44Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIW7_ECTSI2.890e-1697.44Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136009contigH-elongata_contig136009:1159..1314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136009.2545.1mRNA_H-elongata_contig136009.2545.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136009 1159..1326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136009.2545.1 ID=prot_H-elongata_contig136009.2545.1|Name=mRNA_H-elongata_contig136009.2545.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVSLGYHSNIEAHC
Q*
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