prot_H-elongata_contig135882.2530.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135882.2530.1
Unique Nameprot_H-elongata_contig135882.2530.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
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BLAST of mRNA_H-elongata_contig135882.2530.1 vs. uniprot
Match: D7G504_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G504_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 3.920e-23
Identity = 63/93 (67.74%), Postives = 68/93 (73.12%), Query Frame = 0 
Query:    1 MAEAALKSFSSGRDQGEMDELKKLILSEKARTKHLSDGAGGGVGGSGGRNVDGGDVSDDDEGGGDTREREGGRGRI------SGAKDKKQKGT 87
            M+ A LK  SSGRD GEM+ELKKLILSEKARTKH SDG GGG G    R VDGGDVSDDDEG GDTR+R GG          +GAK+KKQKGT
Sbjct:    1 MSAAQLKQVSSGRDLGEMEELKKLILSEKARTKH-SDGGGGGAGE---RRVDGGDVSDDDEGEGDTRDRGGGXXXXXXXXXXAGAKEKKQKGT 89
[Close]
BLAST of mRNA_H-elongata_contig135882.2530.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.120e-20
Identity = 63/93 (67.74%), Postives = 67/93 (72.04%), Query Frame = 0 
Query:    1 MAEAALKSFSSGRDQGEMDELKKLILSEKARTKHLSDGAGGGVGGSGGRNVDGGDVSDDDEGGGDTREREGGRGRIS------GAKDKKQKGT 87
            M+ A LK  SSGRD GEM+ELKKLILSEKARTKH SDG GGG G    R VDGGDVSDDDEG GDTR+R GG           GAK+KKQKGT
Sbjct:    1 MSAAQLKQVSSGRDLGEMEELKKLILSEKARTKH-SDGGGGGAGE---RRVDGGDVSDDDEGEGDTRDRGGGXXXXXXXXXXXGAKEKKQKGT 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135882.2530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G504_ECTSI3.920e-2367.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4J3_9PHAE3.120e-2067.74RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135882contigH-elongata_contig135882:311..953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135882.2530.1mRNA_H-elongata_contig135882.2530.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135882 311..953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135882.2530.1 ID=prot_H-elongata_contig135882.2530.1|Name=mRNA_H-elongata_contig135882.2530.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MAEAALKSFSSGRDQGEMDELKKLILSEKARTKHLSDGAGGGVGGSGGRN
VDGGDVSDDDEGGGDTREREGGRGRISGAKDKKQKGT*
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