prot_H-elongata_contig13572.2522.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13572.2522.1
Unique Nameprot_H-elongata_contig13572.2522.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig13572.2522.1 vs. uniprot
Match: D8LN09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN09_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.440e-26
Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 SFRFPLKVETGGAGVFSMDWTAGAMRYQADRVFDVLDGSCRRLEVTEIGTQDAEIFLPVEKF 62
            + RFPL+VE G  GVFS+DWTAG+ RYQADRVFDVLDGS RRLEVTEIGTQDAE+FLP+EKF
Sbjct:  413 TMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEKF 474          
BLAST of mRNA_H-elongata_contig13572.2522.1 vs. uniprot
Match: A0A7S4B393_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B393_CHRCT)

HSP 1 Score: 70.9 bits (172), Expect = 7.800e-13
Identity = 34/55 (61.82%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    4 FPLKVETGGAGVFSMDWTAGAMRYQADRVFDVLDGSCRRLEVTEIGTQDAEIFLP 58
            FP    T  AG  S+DWTAGAMRYQADR F  LDGS   LE+TEI   DAE +LP
Sbjct:  356 FPTTCATDAAGFISVDWTAGAMRYQADRKFHQLDGSLASLELTEISAADAETYLP 410          
BLAST of mRNA_H-elongata_contig13572.2522.1 vs. uniprot
Match: A0A0M0JC69_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC69_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.820e-11
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 SFRFPLKVETGGAGVFSMDWTAGAMRYQADRVFDVLDGSCRRLEVTEIGTQDAEIFLP 58
            +  FP  V  G AGV S+DW AG+MRYQ DR + V DGS   LE+TEI   DAEI  P
Sbjct:  358 TLAFPTSVAAGAAGVISLDWIAGSMRYQIDRKWKVFDGSLSSLELTEIRKDDAEIVPP 415          
BLAST of mRNA_H-elongata_contig13572.2522.1 vs. uniprot
Match: W7TMB2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.060e-10
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 SFRFPLKVETGGAGVFSMDWTAGAMRYQADRVFDVLDGSCRRLEVTEIGTQDAEIF 56
            S  FP  +  G  G   +DWTAG MR+QADR+FD  DG+   LEVT+IGTQD+  F
Sbjct:  343 SLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTF 398          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13572.2522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN09_ECTSI2.440e-2680.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4B393_CHRCT7.800e-1361.82Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A0M0JC69_9EUKA1.820e-1155.17Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
W7TMB2_9STRA3.060e-1053.57Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13572contigH-elongata_contig13572:84..272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13572.2522.1mRNA_H-elongata_contig13572.2522.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13572 84..272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13572.2522.1 ID=prot_H-elongata_contig13572.2522.1|Name=mRNA_H-elongata_contig13572.2522.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
SFRFPLKVETGGAGVFSMDWTAGAMRYQADRVFDVLDGSCRRLEVTEIGT
QDAEIFLPVEKF*
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