prot_H-elongata_contig135601.2520.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135601.2520.1
Unique Nameprot_H-elongata_contig135601.2520.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A6H5KK65_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK65_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.450e-42
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGATSGNAFFRG AGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGG AWIYDP+
Sbjct:  279 VGNVCLYGATSGNAFFRGLAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGTAWIYDPE 354          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.460e-42
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGATSGNAFFRG AGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGG AWIYDP+
Sbjct: 1116 VGNVCLYGATSGNAFFRGLAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGTAWIYDPE 1191          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A7S3AY96_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY96_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 1.120e-40
Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNV LYGATSG+AFFRGK GERFCVRNSGALAVVEG+GDHGCEYMTGG MVCLG TG NFAAGMSGGIA+IYDP+
Sbjct:  105 VGNVALYGATSGSAFFRGKGGERFCVRNSGALAVVEGIGDHGCEYMTGGRMVCLGETGINFAAGMSGGIAYIYDPQ 180          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A7S1GQI6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQI6_CYCTE)

HSP 1 Score: 147 bits (370), Expect = 5.250e-40
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGATSG AFFRGKAGERFCVRNSGALAV+EGVGDHGCEYMTGG +VCLG TGRNFAAGMSGGIA+IYDP+
Sbjct:  424 VGNVCLYGATSGKAFFRGKAGERFCVRNSGALAVIEGVGDHGCEYMTGGAVVCLGETGRNFAAGMSGGIAYIYDPE 499          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A835YLR4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR4_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.850e-39
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GN CLYGATSG AF RG+AGERFCVRNSGALAVVEGVGDHGCEYMTGG MVCLGPTGRNFAAGMSGGIA++YDP+
Sbjct: 1403 VGNTCLYGATSGKAFLRGRAGERFCVRNSGALAVVEGVGDHGCEYMTGGEMVCLGPTGRNFAAGMSGGIAYVYDPE 1478          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A448ZBQ4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZBQ4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.690e-39
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGATSG AFF GKAGERFCVRNSGALAVVEGVGDHGCEYMTGG MVCLG TGRNFAAGMSGGIA++YDP+
Sbjct: 1309 VGNVCLYGATSGKAFFNGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGVMVCLGETGRNFAAGMSGGIAYVYDPE 1384          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A1Z5KJI0_FISSO (Glutamate synthase (NADPH/NADH) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJI0_FISSO)

HSP 1 Score: 145 bits (367), Expect = 6.400e-39
Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDP 75
            +GNVCLYGAT+G AFFRGKAGERFCVRNSGALAVVEG+GDHGCEYMTGG MVCLG TGRNF AGMSGGIA+IYDP
Sbjct: 1483 VGNVCLYGATAGKAFFRGKAGERFCVRNSGALAVVEGIGDHGCEYMTGGRMVCLGETGRNFGAGMSGGIAYIYDP 1557          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A7S3KXA2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXA2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.730e-39
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGAT+G AFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGG MVCLG TGRNFAAGMSGG+ +IYDP+
Sbjct: 1434 VGNVCLYGATAGKAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGIMVCLGETGRNFAAGMSGGVGYIYDPE 1509          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A7S2EMQ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMQ3_TRICV)

HSP 1 Score: 136 bits (342), Expect = 1.180e-38
Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDP 75
            +GNV LYGAT+G AFFRGK GERFCVRNSGALAVVEG+GDHGCEYMTGG +V LG TGRNFAAGMSGGIA+IYDP
Sbjct:   62 VGNVALYGATAGKAFFRGKGGERFCVRNSGALAVVEGLGDHGCEYMTGGKVVVLGDTGRNFAAGMSGGIAYIYDP 136          
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Match: A0A1E7FRF6_9STRA (Glutamate synthase [NADPH] large chain n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRF6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.190e-38
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGNMVCLGPTGRNFAAGMSGGIAWIYDPK 76
            +GNVCLYGATSG AFF GKAGERFCVRNSGALAVVEGVGDHGCEYMTGG MVCLG TGRNFAAGMSGGI+++YDP+
Sbjct: 1352 VGNVCLYGATSGKAFFNGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGIMVCLGETGRNFAAGMSGGISYVYDPE 1427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135601.2520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK65_9PHAE1.450e-4294.74Reverse transcriptase domain-containing protein n=... [more]
D8LCE0_ECTSI1.460e-4294.74Glutamate synthase (NADH/NADPH-dependent), C-termi... [more]
A0A7S3AY96_9EUKA1.120e-4086.84Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S1GQI6_CYCTE5.250e-4089.47Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A835YLR4_9STRA1.850e-3988.16Glutamine amidotransferase type-2 domain-containin... [more]
A0A448ZBQ4_9STRA4.690e-3989.47Glutamine amidotransferase type-2 domain-containin... [more]
A0A1Z5KJI0_FISSO6.400e-3989.33Glutamate synthase (NADPH/NADH) n=2 Tax=Fistulifer... [more]
A0A7S3KXA2_9STRA8.730e-3988.16Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2EMQ3_TRICV1.180e-3885.33Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7FRF6_9STRA1.190e-3888.16Glutamate synthase [NADPH] large chain n=1 Tax=Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036485Glutamate synthase, alpha subunit, C-terminal domain superfamilyGENE3D2.160.20.60coord: 1..76
e-value: 1.8E-41
score: 143.8
IPR036485Glutamate synthase, alpha subunit, C-terminal domain superfamilySUPERFAMILY69336Alpha subunit of glutamate synthase, C-terminal domaincoord: 2..75
IPR002489Glutamate synthase, alpha subunit, C-terminalPFAMPF01493GXGXGcoord: 1..75
e-value: 2.9E-39
score: 134.6
NoneNo IPR availablePANTHERPTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEcoord: 2..75
NoneNo IPR availablePANTHERPTHR11938:SF132coord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135601contigH-elongata_contig135601:156..1213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135601.2520.1mRNA_H-elongata_contig135601.2520.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135601 156..1213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135601.2520.1 ID=prot_H-elongata_contig135601.2520.1|Name=mRNA_H-elongata_contig135601.2520.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
LGNVCLYGATSGNAFFRGKAGERFCVRNSGALAVVEGVGDHGCEYMTGGN
MVCLGPTGRNFAAGMSGGIAWIYDPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036485Glu_synth_asu_C_sf
IPR002489Glu_synth_asu_C