prot_H-elongata_contig13553.2515.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13553.2515.1
Unique Nameprot_H-elongata_contig13553.2515.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A6H5KU03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU03_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 5.550e-56
Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 0
Query:    1 WDCWETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQKFGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTRWATEEAG 111
            WDCWETDRRGRTALFWAAG GS EA  AL+EG+GGLRPQ   GDGSTPLHWA  GVET++FGTGGHV+VCRWL++ G D +A T EGNTV+MWAAWAGGLD TRWA EEAG
Sbjct:  240 WDCWETDRRGRTALFWAAGGGSVEACEALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNVCRWLLNLGVDTKARTSEGNTVIMWAAWAGGLDATRWAVEEAG 350          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: D8LGD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD8_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.240e-55
Identity = 86/111 (77.48%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 WDCWETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQKFGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTRWATEEAG 111
            WDCWETDRRGRTALFWAAG GS EA  AL+EG+GGLRPQ   GDGSTPLHWA  GVET++FGTGGHV+VCRWL+  G D +A T EGNTV+MWAAWAGGLD TRWA EEAG
Sbjct:  344 WDCWETDRRGRTALFWAAGGGSVEACKALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNVCRWLLDLGVDTKARTSEGNTVVMWAAWAGGLDATRWAVEEAG 454          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A7S0NRB7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NRB7_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 3.170e-21
Identity = 53/114 (46.49%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    5 ETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQK-------FGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTRWATEEAG 111
            + DRRG + L +AAG G  +  +   E  GGL     A DG+TPLHWA  G+ +Q+       FGTGGH     WLV RGADPRA T  GN+VL W AWAGG     W  +  G
Sbjct:  121 DRDRRGASVLHYAAGHGHVDCCAWACE-HGGLGVDDRASDGATPLHWAVAGMRSQRSSGMSSGFGTGGHQRAASWLVDRGADPRACTHVGNSVLHWCAWAGGQQAFEWLADHLG 233          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A0M0JUH1_9EUKA (Ankyrin repeat protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUH1_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 2.320e-17
Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 0
Query:    7 DRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQK--------------------------FGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTRWATE 108
            D+RG +AL +AAG G  E  + L     GL     A DG+TPLHWA  G+ ++                           FGTGGH+ + +WLV RGAD  A T +GN++L W AWAG L+V  W T+
Sbjct:   44 DKRGASALHYAAGHGHVECCALLCAA--GLEVDDRAQDGATPLHWAVAGMTSRGNPRDRAHDGAPRADDRQGRDSAGPNGFGTGGHLGMAKWLVGRGADVGAQTVDGNSILHWCAWAGTLEVLTWLTD 169          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: R1CVS8_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CVS8_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 1.180e-16
Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    5 ETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQK-------FGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTRWATEEAG 111
            + DRRG TAL  +AG G      AL+     L       +G+TPLH+A  G+++++       FGTGGHV   R L+ RGADP A T +GN+V+ WAAWAGG  + R   EE G
Sbjct:   61 DRDRRGATALHLSAGHGHDSCCEALLPL---LDVNDHTREGATPLHFAVAGMKSRRGRGGQNGFGTGGHVSTARLLLDRGADPAAVTSDGNSVVHWAAWAGGTKLLRLLCEEHG 171          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A7S2ESB1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ESB1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.340e-14
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 0
Query:    5 ETDRRGRTALFWAAGAGSAEASSALMEG-------------DGGLRPQA--------VAGDGSTPLHWAATGVETQKFGTGGHVDVCRWLVSRGADPR-------ATTCEGNTVLMWAAWAGGLDVTR 104
            E D RG + L WAAG G+ +   AL E              D      A        +  DG+T LHWAA G ++++FG GGH+++CR+L+    D +       A T +GN+VLMWAAW+G LDV +
Sbjct:  188 ERDVRGASLLHWAAGTGNLDGLVALCESMSPVINTTNHDENDQNKDTDAASIAAWTRIKRDGATTLHWAAAGAKSKEFGCGGHIEICRYLLDSIKDSKSRKDLANAQTKDGNSVLMWAAWSGTLDVVK 315          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A7S3PXD8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXD8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.760e-14
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 0
Query:    5 ETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVA----GDGSTPLHWAATGVETQKFGTGGHVDVCRWLVSRGADPRAT-------TCEGNTVLMWAAWAGGLDVTR 104
            E D R  + L W+AGAG   +   L+    G   +AV      DG++ LHWAA G E + FG GGH++VC++L+     P A        T +GN++LMWAAW+G LDV +
Sbjct:  336 ERDVRDISLLHWSAGAGELGSLRQLIAALPGGMEEAVRLRADRDGASILHWAAAGSEAKAFGCGGHINVCKYLMENCGGPSAQKEVVNGLTKDGNSILMWAAWSGSLDVVK 446          
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Match: A0A8J2X5G3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.580e-6
Identity = 37/100 (37.00%), Postives = 45/100 (45.00%), Query Frame = 0
Query:    5 ETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLHWAATGVETQKFGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGLDVTR 104
            + DRRG +A   AAG G+ +  SA                      WAA GV     GTG        L+S GAD  ATT +GN V+ WAAW GG+   R
Sbjct:  181 DRDRRGASAAHVAAGRGAVDVLSAXXXXXXXXXXXXXXXX-XXXXXWAACGVRGNAAGTGFEEGAAELLLSAGADACATTHDGNAVIHWAAWQGGVSAVR 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13553.2515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KU03_9PHAE5.550e-5677.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGD8_ECTSI1.240e-5577.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0NRB7_9EUKA3.170e-2146.49Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A0M0JUH1_9EUKA2.320e-1739.06Ankyrin repeat protein (Fragment) n=1 Tax=Chrysoch... [more]
R1CVS8_EMIHU1.180e-1643.86Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S2ESB1_9STRA1.340e-1437.50Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3PXD8_9STRA2.760e-1440.54Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8J2X5G3_9STRA1.580e-637.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 9..40
e-value: 910.0
score: 5.3
coord: 86..116
e-value: 27.0
score: 13.6
coord: 44..82
e-value: 1.1E-4
score: 31.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 44..85
score: 8.656
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..91
e-value: 4.7E-20
score: 73.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 92..138
e-value: 3.7E-7
score: 31.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..137
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 9..83
e-value: 1.8E-8
score: 34.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 9..138
score: 20.925
NoneNo IPR availablePANTHERPTHR24161FAMILY NOT NAMEDcoord: 44..137
coord: 7..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13553contigH-elongata_contig13553:6817..7837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13553.2515.1mRNA_H-elongata_contig13553.2515.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13553 6817..7837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13553.2515.1 ID=prot_H-elongata_contig13553.2515.1|Name=mRNA_H-elongata_contig13553.2515.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
WDCWETDRRGRTALFWAAGAGSAEASSALMEGDGGLRPQAVAGDGSTPLH
WAATGVETQKFGTGGHVDVCRWLVSRGADPRATTCEGNTVLMWAAWAGGL
DVTRWATEEAGADMDAVNANGCSVAHWAASGGDEDVCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom