prot_H-elongata_contig135455.2506.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135455.2506.1
Unique Nameprot_H-elongata_contig135455.2506.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length407
Homology
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.040e-45
Identity = 96/272 (35.29%), Postives = 153/272 (56.25%), Query Frame = 0
Query:  146 NIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            +I +FH +  H  E + R TA+  G +L G    C  CS S+  R  +++ T+ R+D++ GR+F D+ G     S+ G  + ++  DDFTR   + F+++KSDA +A R  +    A  G+   + ++R+D+GG++ G  F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+     SPYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:   33 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVGPSRD 301          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.180e-44
Identity = 129/423 (30.50%), Postives = 212/423 (50.12%), Query Frame = 0
Query:    1 MTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            MT   A ++D  P      V   GG    ++  G L L+    ++ F+     + LK+V + PNLG +NL S     +F             +     G+  F    ++ +G+L       +A+  RL +      LAA        + + ++ +FH +  H  + + R TA+  G +L G    C  CS ++  +  + + T++R+D++ GR+F+D+ G     S+ G  + M+  DDFTR   + F+KHKSDA  A R  +    A +G+   + ++R+D+GGE+ G +F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+     SPYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:  535 MTDSLACMKDLKP--CHKSVNGIGGVSCEISFSGTLELVFVTADSEFS-----MELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFKGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRD 933          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.030e-44
Identity = 129/423 (30.50%), Postives = 212/423 (50.12%), Query Frame = 0
Query:    1 MTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            MT   A ++D  P      V   GG    ++  G L L+    ++ F+     + LK+V + PNLG +NL S     +F             +     G+  F    ++ +G+L       +A+  RL +      LAA        + + ++ +FH +  H  + + R TA+  G +L G    C  CS ++  +  + + T++R+D++ GR+F+D+ G     S+ G  + M+  DDFTR   + F+KHKSDA  A R  +    A +G+   + ++R+D+GGE+ G +F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+     SPYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:  242 MTDSLACMKDLKP--CHKSVNGIGGVSCEISFSGTLELVFVTADSEFS-----VELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFKGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRD 640          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.750e-44
Identity = 128/409 (31.30%), Postives = 204/409 (49.88%), Query Frame = 0
Query:   15 PAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            P    V   GG    VA  G L L+    ++ F+     + LK+V + PNLG +NL S     +F             +     G+  F    ++ +G+L       +A+  RL +      LAA          + +I +FH +  H  E + R TA+  G +L G    C  CS S+  R  +++ T+ R+D++ GR+F+D+ G     S+ G  + M+  DDFTR   + F+++KSDA +A R  +    A  G+   + ++R+D+GGE+ G +F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+      PYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:   13 PCHKSVNGIGGVSCEVAFSGTLELVFVTADSEFS-----VELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFNGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRD 399          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 9.870e-44
Identity = 99/272 (36.40%), Postives = 155/272 (56.99%), Query Frame = 0
Query:  146 NIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            +I +FH +  H  E + R TA+  G +L G    C  CS S+  R  ++  T+ R+D++ GR+F+D+ G     S+ G  + M+  DDFTR   +CF+++KSDA +A R  +    A  G+   + ++R+D+GGE+ G +F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+     SPYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:  186 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRD 454          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.950e-43
Identity = 129/398 (32.41%), Postives = 194/398 (48.74%), Query Frame = 0
Query:   19 RVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 402
            RV+ A G   P+ GYG + + +   +      T  L LK VAHVP L  +NL+S   LT  FD            +   RGG  + + P R  N  ++   R H         P  A A +       +I  FH   GH  E + R TA+  G  L G  + C+ CS ++     +   T  RA ++  R+F+D+SG     SL G  + ++  DD+TR+  V F+KHKSDA  A    + +  A      + V+R+D+GGE+  G+F     +  IK++ TP ++P+YNGV ERALGL++D  +A       L  G     S  LWA+A+A++C+  N  +++S     SPYE+W+G  P     PP  T  +L+    ++K  HK  P+   C  L
Sbjct:  395 RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 771          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.970e-43
Identity = 129/398 (32.41%), Postives = 194/398 (48.74%), Query Frame = 0
Query:   19 RVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 402
            RV+ A G   P+ GYG + + +   +      T  L LK VAHVP L  +NL+S   LT  FD            +   RGG  + + P R  N  ++   R H         P  A A +       +I  FH   GH  E + R TA+  G  L G  + C+ CS ++     +   T  RA ++  R+F+D+SG     SL G  + ++  DD+TR+  V F+KHKSDA  A    + +  A      + V+R+D+GGE+  G+F     +  IK++ TP ++P+YNGV ERALGL++D  +A       L  G     S  LWA+A+A++C+  N  +++S     SPYE+W+G  P     PP  T  +L+    ++K  HK  P+   C  L
Sbjct:  408 RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 784          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.990e-43
Identity = 129/398 (32.41%), Postives = 194/398 (48.74%), Query Frame = 0
Query:   19 RVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 402
            RV+ A G   P+ GYG + + +   +      T  L LK VAHVP L  +NL+S   LT  FD            +   RGG  + + P R  N  ++   R H         P  A A +       +I  FH   GH  E + R TA+  G  L G  + C+ CS ++     +   T  RA ++  R+F+D+SG     SL G  + ++  DD+TR+  V F+KHKSDA  A    + +  A      + V+R+D+GGE+  G+F     +  IK++ TP ++P+YNGV ERALGL++D  +A       L  G     S  LWA+A+A++C+  N  +++S     SPYE+W+G  P     PP  T  +L+    ++K  HK  P+   C  L
Sbjct:  551 RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 927          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 3.150e-43
Identity = 99/273 (36.26%), Postives = 154/273 (56.41%), Query Frame = 0
Query:  146 NIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFA---PEGLKIGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 407
            +I +FH +  H  E + R TA+  G +L G    C  CS S+  R  +++ T+ R+D++ GR+F+D+ G     S+ G  + M+  DDFTR   + F+K++SDA  A R  +    A   P  ++I  +R+D+GGE+ G +F S  +E+ IK++ TP Y+PQYNGV ER LGL+ +  +A      +L G ++  K+D+LWA+AM + C+  N    S+     SPYE+WYG  P+     P     Y R  +P  KL P+G SC  +  + D
Sbjct:  253 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRD 521          
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 6.730e-42
Identity = 129/398 (32.41%), Postives = 189/398 (47.49%), Query Frame = 0
Query:   19 RVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 402
            RV+ A G   P+ GYG + + +          T  L LK VAHVP L  +NL+S   LT  FD   +        +   RGG    + P R  N  +    R H         P  A A +A       I  FH   GH  E + R TA+  G  L G  + C+ CS ++     +   T  RA +R  R+F+D+SG     SL G  + ++  D +TR+  V F+KHKSDA  A    + +  A      + V+R+D+GGE+  G+F     +  IK++ TP ++P+YNGV ERALGL++D  +A       L  G     S   WA+A+A+ C+  N  +++S     SPYE+W+G  P     PP  T  +L+    ++K  HK  P+   C  L
Sbjct:  421 RVRVAAGETFPIVGYGDVTVTLSSRGG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFQTKTLNKHELELERGGGESVYSP-RCGNLYVHNGCRTHTEHAYTAIAPGDAKASSAPVE----INDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPS--FWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 797          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE9.040e-4535.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBA7_9PHAE2.180e-4430.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE3.030e-4430.50Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE3.750e-4431.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE9.870e-4436.40Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JZQ8_9PHAE1.950e-4332.41Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.970e-4332.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.990e-4332.41Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JV76_9PHAE3.150e-4336.26Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JXF7_9PHAE6.730e-4232.41Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 195..379
e-value: 3.5E-27
score: 96.9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 207..318
e-value: 5.2E-14
score: 52.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 200..368
score: 19.095
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 53..324
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 53..324
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 206..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135455contigH-elongata_contig135455:532..1752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135455.2506.1mRNA_H-elongata_contig135455.2506.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135455 502..1752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135455.2506.1 ID=prot_H-elongata_contig135455.2506.1|Name=mRNA_H-elongata_contig135455.2506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=407bp
MTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANS
TRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGK
PLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKF
HQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENR
ADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDAT
NALRDIINDYFAPEGLKIGVIRTDDGGEWHGQFLSFLSEIGIKRQSTPPY
TPQYNGVVERALGLLRDKTVALLRGVIESKSDRLWAQAMAYTCDMWNRCT
SSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCI
MLELASD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf