prot_H-elongata_contig13534.2498.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13534.2498.1
Unique Nameprot_H-elongata_contig13534.2498.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
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BLAST of mRNA_H-elongata_contig13534.2498.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.180e-20
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MPWICGEPECKKQPYYAEPGSKKPKFCFLHKQAGHIDVRNKR 42
            MPWICGEPECKKQPYYAEPG KKPK+CFLHK+ GHIDVRNKR
Sbjct:    1 MPWICGEPECKKQPYYAEPGQKKPKYCFLHKKPGHIDVRNKR 42
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BLAST of mRNA_H-elongata_contig13534.2498.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 5.980e-18
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:    1 MPWICGEPECKKQPYYAEPGSKKPKFCFLHKQAGHIDVRNKR 42
            MPWICGE ECKKQPYY EPG KKPK+CFLHK+ G IDVRNKR
Sbjct:    1 MPWICGETECKKQPYYGEPGQKKPKYCFLHKKPGQIDVRNKR 42
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13534.2498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMP7_ECTSI1.180e-2090.48EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KYH5_9PHAE5.980e-1883.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13534contigH-elongata_contig13534:8148..8273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13534.2498.1mRNA_H-elongata_contig13534.2498.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13534 8148..8273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13534.2498.1 ID=prot_H-elongata_contig13534.2498.1|Name=mRNA_H-elongata_contig13534.2498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MPWICGEPECKKQPYYAEPGSKKPKFCFLHKQAGHIDVRNKR
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