prot_H-elongata_contig135127.2482.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135127.2482.1
Unique Nameprot_H-elongata_contig135127.2482.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: D8LCD1_ECTSI (Ribosomal protein L34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD1_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 6.370e-24
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 MVRGNRRITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSD--CGISLPGVSLCSRHIYPR 67
            MVRG+ RITYTRRHAYHT SNKAK VKTPGGKLVAHY KKSAKG  C+D  C ++LPG+    +H+ P+
Sbjct:   19 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGVHCADASCSVALPGI----KHMRPK 83          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A835ZPJ0_9STRA (Ribosomal protein L34e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.940e-21
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    4 GNRRITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIYPRAVHK 71
            G++R+TYTRRHAY T SNK KVV+TPGGK VAHY KK A GP+C DC I+LPG++      Y     +
Sbjct:    3 GDKRVTYTRRHAYATASNKIKVVRTPGGKHVAHYRKKKANGPKCGDCKIALPGIACLRPKEYKNLKRR 70          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A7S2UXI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.910e-21
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIYP 66
            R+ Y RRH+Y T SNK K+VKTPGG+LVAHYH K AKGP+C++CGISLPG+    +H+ P
Sbjct:    6 RVQYRRRHSYATKSNKIKIVKTPGGRLVAHYHTKKAKGPKCAECGISLPGI----KHVRP 61          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A6U1TEH8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1TEH8_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 4.160e-20
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIYPR 67
            R+TY RRH Y+T SNK K+VKTPGGKL   Y  KSAKGP C DCGISLPG++    H+ P+
Sbjct:    4 RVTYRRRHCYNTKSNKTKIVKTPGGKLTVQYRTKSAKGPSCGDCGISLPGIA----HLRPK 60          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A6V2RVW8_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2RVW8_HETAK)

HSP 1 Score: 85.9 bits (211), Expect = 4.770e-20
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIYPR 67
            R+ YTRRH Y T SNK K+ KTPGG+LVAHYHKK A GP+CSDCG  L G+    +H+ P+
Sbjct:    6 RVQYTRRHCYATKSNKVKITKTPGGRLVAHYHKKKAAGPKCSDCGTVLAGI----KHLRPK 62          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A077WWL3_9FUNG (Putative 60S ribosomal protein L34-B n=3 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WWL3_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 6.240e-17
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGV-SLCSRHIYPRAVHK 71
            R+TY RR +Y+T SN+ KVVKTPGGKLV  Y KK  K PRC DCG++LPG+ +L SR +   A ++
Sbjct:    4 RLTYRRRLSYNTRSNRVKVVKTPGGKLVYQYQKKPVKAPRCGDCGVALPGLKALRSRKLSNLAKNQ 69          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A642UX31_DIURU (Uncharacterized protein n=1 Tax=Diutina rugosa TaxID=5481 RepID=A0A642UX31_DIURU)

HSP 1 Score: 77.0 bits (188), Expect = 1.620e-16
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIY 65
            R+TY RR+ Y+T SNK KVVKTPGGKL+A + KK A  P+C DCGI+LPGV+      Y
Sbjct:    4 RVTYRRRNPYNTKSNKIKVVKTPGGKLIAQHVKKIASRPKCGDCGIALPGVAALRPREY 62          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A8H7SEY4_9FUNG (Uncharacterized protein n=2 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SEY4_9FUNG)

HSP 1 Score: 76.3 bits (186), Expect = 2.520e-16
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGV 57
            R+TY RR +Y+T SN+ KVVKTPGGKLV  Y KK  K PRC DCG++LPG+
Sbjct:    4 RLTYRRRLSYNTRSNRVKVVKTPGGKLVYQYQKKPVKAPRCGDCGVALPGL 54          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A485KJ51_9STRA (Aste57867_7967 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KJ51_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.390e-16
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    5 NRRITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIY 65
            N RITY RRH+Y T SN+   VKTPGGKLVAHY KK++ GP+C DC  SL G+   +   Y
Sbjct:    4 NVRITYRRRHSYATKSNRIVPVKTPGGKLVAHYRKKTSHGPKCGDCKQSLKGIKHLATKAY 64          
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Match: A0A7S1XUC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUC3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.760e-16
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    7 RITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDCGISLPGVSLCSRHIYPRA 68
            R+T  RRHAY TLSNK K VKTPGG L AHYH+K     +C DCG +LPG+         RA
Sbjct:    6 RVTNPRRHAYRTLSNKVKAVKTPGGSLKAHYHRKKPASVKCGDCGTALPGLKALRPIAMKRA 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135127.2482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCD1_ECTSI6.370e-2468.12Ribosomal protein L34 n=1 Tax=Ectocarpus siliculos... [more]
A0A835ZPJ0_9STRA1.940e-2157.35Ribosomal protein L34e-domain-containing protein n... [more]
A0A7S2UXI2_9STRA2.910e-2163.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U1TEH8_9EUKA4.160e-2062.30Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A6V2RVW8_HETAK4.770e-2060.66Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A077WWL3_9FUNG6.240e-1756.06Putative 60S ribosomal protein L34-B n=3 Tax=Licht... [more]
A0A642UX31_DIURU1.620e-1659.32Uncharacterized protein n=1 Tax=Diutina rugosa Tax... [more]
A0A8H7SEY4_9FUNG2.520e-1664.71Uncharacterized protein n=2 Tax=Mucor circinatus T... [more]
A0A485KJ51_9STRA4.390e-1657.38Aste57867_7967 protein n=8 Tax=Saprolegniaceae Tax... [more]
A0A7S1XUC3_9STRA5.760e-1654.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 29..46
score: 46.03
coord: 16..29
score: 53.57
coord: 47..57
score: 42.86
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 6..67
e-value: 2.1E-20
score: 72.8
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 6..66
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 18..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135127contigH-elongata_contig135127:1329..1547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135127.2482.1mRNA_H-elongata_contig135127.2482.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135127 1329..1547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135127.2482.1 ID=prot_H-elongata_contig135127.2482.1|Name=mRNA_H-elongata_contig135127.2482.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MVRGNRRITYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCSDC
GISLPGVSLCSRHIYPRAVHKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_L34Ae
IPR018065Ribosomal_L34e_CS