prot_H-elongata_contig135073.2476.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig135073.2476.1 vs. uniprot
Match: A0A151R4G2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R4G2_CAJCA) HSP 1 Score: 53.1 bits (126), Expect = 1.680e-6 Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0
Query: 4 WISDDGASRHMTSHDSM-TNYRECNGI--VRTAGGDILPIEGVGDILLRFLSDSGAFEIQLLNVAFVPQLSHNLLS 76
WISD GAS HMT SM +N R+C+ I V G LPI G+GD +++ + + L NV VP L+ NLLS
Sbjct: 19 WISDTGASNHMTGTSSMLSNIRQCSSIDSVLIGDGSPLPIHGIGDSVIKQKN----ITLPLNNVLLVPNLTKNLLS 90
BLAST of mRNA_H-elongata_contig135073.2476.1 vs. uniprot
Match: A0A2K3L0D5_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L0D5_TRIPR) HSP 1 Score: 52.0 bits (123), Expect = 6.520e-6 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query: 4 WISDDGASRHMTSHDSM-TNYRECNG--IVRTAGGDILPIEGVGDILLRFLSDSGAFEIQLLNVAFVPQLSHNLLS 76
WISD GAS HMT SM +N R+C+G V G LPI G+GD ++ + + + L +V VP L+ NLLS
Sbjct: 340 WISDTGASNHMTGKTSMLSNIRQCSGTDFVLIGDGSPLPIHGIGDSFIKQKNTT----LPLHDVLLVPDLTKNLLS 411
BLAST of mRNA_H-elongata_contig135073.2476.1 vs. uniprot
Match: A0A2Z6NS08_TRISU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NS08_TRISU) HSP 1 Score: 51.2 bits (121), Expect = 1.240e-5 Identity = 33/76 (43.42%), Postives = 41/76 (53.95%), Query Frame = 0
Query: 4 WISDDGASRHMTSHDSMT-NYRECNGI--VRTAGGDILPIEGVGDILLRFLSDSGAFEIQLLNVAFVPQLSHNLLS 76
WISD GAS HMT SM N R+C+G V G LPI G+GD ++ + L +V VP L+ NLLS
Sbjct: 339 WISDTGASNHMTGKTSMLHNIRQCSGTDSVLIGDGSPLPIHGIGDSFIK----QNNITLPLHDVLLVPDLTKNLLS 410 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135073.2476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig135073.2476.1 ID=prot_H-elongata_contig135073.2476.1|Name=mRNA_H-elongata_contig135073.2476.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bpback to top |