prot_H-elongata_contig13501.2472.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13501.2472.1
Unique Nameprot_H-elongata_contig13501.2472.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length297
Homology
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BLAST of mRNA_H-elongata_contig13501.2472.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.140e-79
Identity = 140/308 (45.45%), Postives = 197/308 (63.96%), Query Frame = 0 
Query:    1 LKRALKEAKRVGEAIDPDAMSQIERAWNGDEDGLHPGFRQVEDEVLRI-----------REDMQAFGEKMQGIVGDIHDKVRSRSRKGAMLDGDWSGGSVPKWDALTQQGATEMIKDLSSEVLGDAANDAVAAFEGRLAEALSEGNIRAAFDLWHRLLDIPGVQLLTRNRKLWEGAKGTVRKYLNGFMTVETRKDVHRAVNATADFALHFAGLSRNVGKTDNEIFQEISQSMCHFQGATEKLWPLMKRALPLLGYEAYISSADSVIRASVMSRVTLTVTASSLLGMSPFNDPFVMSLIAAFALGHLSK 297
            L RA ++AKR+GE ++PDA++  E+AW      L P  RQ  D+               R+          G      D+  + S      + +  G     W+ L +       + +  +V G+AA++ +A+FE RL+EALSEGN+RAA  LW RLLD PGVQLL ++R+LW GA+  VR+YL+GF++ ++ K+  RAVNATADFALHFAGLSRN  K+D+E+F+E+S  +CH QGA EKLWPL   ALPLLGY+ Y    +S IR++ +SRVT TV+A+ LLG++P  DPF+++LIA+F+LGHLSK
Sbjct:   18 LGRAFQQAKRIGEIVNPDAVANAEQAWKE----LAPDLRQAADDXXXXXXXXXXXXXXARDIWXXXXXXXSGFGAVETDRTAADSSATFAQEREEGGSVTVGWEGLKKD-IERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNP-RDPFLLTLIASFSLGHLSK 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13501.2472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE3.140e-7945.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13501contigH-elongata_contig13501:5693..7864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13501.2472.1mRNA_H-elongata_contig13501.2472.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13501 5693..7864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13501.2472.1 ID=prot_H-elongata_contig13501.2472.1|Name=mRNA_H-elongata_contig13501.2472.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
LKRALKEAKRVGEAIDPDAMSQIERAWNGDEDGLHPGFRQVEDEVLRIRE
DMQAFGEKMQGIVGDIHDKVRSRSRKGAMLDGDWSGGSVPKWDALTQQGA
TEMIKDLSSEVLGDAANDAVAAFEGRLAEALSEGNIRAAFDLWHRLLDIP
GVQLLTRNRKLWEGAKGTVRKYLNGFMTVETRKDVHRAVNATADFALHFA
GLSRNVGKTDNEIFQEISQSMCHFQGATEKLWPLMKRALPLLGYEAYISS
ADSVIRASVMSRVTLTVTASSLLGMSPFNDPFVMSLIAAFALGHLSK
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