prot_H-elongata_contig135003.2471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135003.2471.1
Unique Nameprot_H-elongata_contig135003.2471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length209
Homology
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: D8LBA4_ECTSI (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA4_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.810e-89
Identity = 147/201 (73.13%), Postives = 159/201 (79.10%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADD-----ADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRA-GDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERVPDSSA 195
            F+VIVAATAGSLGIGKNG LPWRLAADMAYFKRCTSTP+TS          DK+NAVIMGRKTWQSIP+RFRPL GRRN++LSRNP AR+ L LP  VLLAGSL EAL LL+ P   +EVDKVFVIGG SVYAEA+   LCEK+LLTSV    DGRFDDCD HFPAL P+ FKLVKKG  QEEKG E SFDEYE V  S A
Sbjct:   16 FVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLS-PAAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGEAQEEKGVELSFDEYESVNHSEA 215          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A835Z035_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z035_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.070e-62
Identity = 108/196 (55.10%), Postives = 139/196 (70.92%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRA-GDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERVPDSSA 195
            F+V+VAATAGSLGIGK G +PW+LA DMAYFK+ TS       D A KVNAV+MGRKTW+SIP+RFRPL GR N++L+RNPRAR++L LP  V++A SL +ALS L+      +V K+FVIGG  VY EAL    C+++ LT+V A  DG+  +CD  FP L P +FKLV +G  Q E G ++ F+ YER   S+A
Sbjct:    8 FVVVVAATAGSLGIGKGGGIPWKLAGDMAYFKKVTSA-----CDIAGKVNAVVMGRKTWESIPQRFRPLPGRCNVVLTRNPRARQELVLPDDVIIARSLEDALSCLSTQDMRDKVHKIFVIGGGQVYKEALGMEQCKQVHLTTVEAPADGKQFECDTFFPPLDPASFKLVSRGDKQSENGIDYRFNVYERQDSSAA 198          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A4D9D1L8_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L8_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.100e-49
Identity = 97/196 (49.49%), Postives = 120/196 (61.22%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKR---CTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGR---FDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERV 190
            F ++VAATA + GIGK G LPW L  DM +FKR   CTS P        DK+NAVIMGR+TWQSIP++FRPL  R N++LSRNP  RE L+LP  V +A SL  AL+LLA     + V+KVFVIGG++VY EA+    CE I  TS+    G    F DCD HFP +    + LV    V  +    F F  YER+
Sbjct:   28 FTIVVAATAKTFGIGKAGQLPWNLPQDMEHFKRLTACTSVP--------DKINAVIMGRRTWQSIPEKFRPLRNRLNVVLSRNPGIREQLNLPQGVRVATSLKAALALLAHGNDASVVEKVFVIGGAAVYREAVISEACEAIEFTSIEEKRGATPLFADCDAHFPVIPATEYCLVSSTPVLSQNALRFRFQRYERL 215          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A7S2WWT1_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWT1_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.470e-49
Identity = 94/190 (49.47%), Postives = 120/190 (63.16%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERV 190
            F +IVAATA SLGIG+ G LPWRL  DMA+FKR T +    G       NAVIMGRKT+QSIP RFRPL GR N+++SRNP  R +L LP  VL+A SL +AL  L        V +V+VIGG S+Y EA+ +  C  +L+T V + +  F+DCD HFPA+    F L+       +KG   SF+ +ERV
Sbjct:    5 FDIIVAATASSLGIGRQGKLPWRLGVDMAFFKRATLSAGLPGQS-----NAVIMGRKTYQSIPARFRPLNGRVNVVISRNPEIRAELDLPAEVLVASSLDDALDQLGSSKVGQAVSQVYVIGGGSIYDEAVAHEACRHLLVTMVHSEE--FEDCDTHFPAIDTARFSLLSSSAPFTDKGVVCSFNVFERV 187          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A059WZ24_9BACT (Dihydrofolate reductase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059WZ24_9BACT)

HSP 1 Score: 171 bits (434), Expect = 4.440e-49
Identity = 93/205 (45.37%), Postives = 128/205 (62.44%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERVPDSSAVGVTVTVPTQ 205
            F V+VAAT+ + GIG+ GTLPW++A DM +FK  TST S+       K+NAVIMGRKT++SIP +F+PL GR N+ILSRNP  R  L+LP SV +  +L++AL+LL        +D++FVIGG SVY EAL    C KI LT V        D D  FP ++   F++ ++G  +     ++ F EYE++  SS    T T PT+
Sbjct:    6 FSVVVAATSNTFGIGRKGTLPWKIAEDMEFFKTITSTASSG------KINAVIMGRKTYESIPAKFKPLSGRTNVILSRNPELRNVLNLPESVHVKSNLSDALNLLKEDQA---IDRIFVIGGESVYREALESKFCSKIYLTEVNTD---IPDIDTFFPVIRANVFRMTQRGEEKSNGELKYRFTEYEQIQPSS----TFTTPTE 194          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A7S2MDM9_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDM9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.930e-47
Identity = 85/169 (50.30%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDVHFPALKPEAFKLV 169
            F VIVAATA + GIG+ G LPW++  DMA+FKR T T    G      +NAVIMGRKT+QSIP RFRPL+GR N+++SRNP  R++L LP  VL+AGSL++AL+++        V +VFVIGG S+Y EA+   LC ++++T+V +    F+DCDV FP+L  + + L 
Sbjct:    4 FDVIVAATASTFGIGRRGRLPWKIGVDMAFFKRATLTCDMDGM-----MNAVIMGRKTYQSIPARFRPLQGRVNVVISRNPNLRQELELPDDVLVAGSLSDALAMIGEGTLNDRVSEVFVIGGGSIYEEAVKSQLCSRVVMTTVHSTG--FEDCDVSFPSLPSDEYILT 165          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: F0YJX9_AURAN (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJX9_AURAN)

HSP 1 Score: 171 bits (432), Expect = 4.920e-47
Identity = 92/182 (50.55%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    4 IVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFD 185
            IVAA AGS GIGK+GTLPW+LA DM YFK+ TS      A    K NA +MGRKTW SIP +FRPL GR+N++LSRNP ARE+L LPP V +  SL  A+  LA      ++ +VFVIGG  VYA AL    C K+LLTS+    G F DCD  FP      F     G    E G  + F+
Sbjct:   20 IVAAVAGSYGIGKDGTLPWKLAGDMKYFKKVTS------AAPEGKTNACVMGRKTWLSIPPKFRPLGGRKNVVLSRNPNAREELGLPPDVFVCPSLDAAVDALAGE---ADLGEVFVIGGGQVYASALADARCTKVLLTSIDDAAGAFADCDAVFPDPAKAGFASAASGEALVENGVAYRFE 192          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A7S2MDD2_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDD2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.020e-46
Identity = 80/156 (51.28%), Postives = 109/156 (69.87%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDV 156
            F VIVAATA + GIG+ G LPW++  DMA+FKR T T    G      +NAVIMGRKT+QSIP RFRPL+GR N+++SRNP  R++L LP  VL+AGSL++AL+++        V +VFVIGG S+Y EA+   LC ++++T+V +    F+D DV
Sbjct:    4 FDVIVAATASTFGIGRRGRLPWKIGVDMAFFKRATLTCDMDGM-----MNAVIMGRKTYQSIPARFRPLQGRVNVVISRNPNLRQELELPDDVLVAGSLSDALAMIGEGTLNDRVSEVFVIGGGSIYEEAVKSQLCSRVVMTTVHSTG--FEDSDV 152          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A7R9UC25_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC25_9STRA)

HSP 1 Score: 164 bits (414), Expect = 3.610e-44
Identity = 92/192 (47.92%), Postives = 123/192 (64.06%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPP-HTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDD--CDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYER 189
            F+V+VAATA SLGIGK+G LPWR+  DM++FK+ TS     G       NAVIMGRKTW+SIP +FRPL GR NI+LSR+P +     LP  V +A SL EAL+++A    H  +V+ VFVIGG SVYA+AL  + C++I+LT V   +G  +D  CD   P +   A+  V +   Q ++   +SF  YER
Sbjct:   48 FVVVVAATASSLGIGKDGKLPWRIRGDMSFFKKLTSETRIPGHR-----NAVIMGRKTWESIPSKFRPLSGRLNIVLSRHPESLRG-QLPEQVAVASSLEEALAMVAPGGIHCDQVEDVFVIGGGSVYADALRSSYCKRIVLTEVTPLEGTEEDLGCDTFLPRIDGSAYMRVAESGDQVDENFRYSFVTYER 233          
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Match: A0A059WZL2_9BACT (Dihydrofolate reductase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059WZL2_9BACT)

HSP 1 Score: 157 bits (396), Expect = 2.610e-43
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 0
Query:    1 FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVNAVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLAEALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGRFDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERVPD 192
            F ++VAAT  S GIG+ GT+PW+L  DM YFK  TST + + A  A   NAVIMG+KT+ SIP +FRPL GR N++LSR+   RE+L LP +VL A SL EAL LL+ P   + +D++FVIGG+SVY EAL    C  I LT +      + D D  FP +  + F L  + +V  E    + F  ++ V +
Sbjct:    4 FHLVVAATHVSQGIGRAGTIPWKLKGDMQYFKDVTSTVTKANA--ASLQNAVIMGKKTYLSIPVKFRPLVGRINVVLSRSSGVREELGLPDTVLTASSLEEALQLLSSPSVESRIDQIFVIGGASVYKEALESPRCGTIYLTKILK---EYPDMDTFFPIIPADKFTLTSRTQVTTENDISYQFCTFDPVEE 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135003.2471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA4_ECTSI1.810e-8973.13Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A835Z035_9STRA4.070e-6255.10Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A4D9D1L8_9STRA2.100e-4949.49Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S2WWT1_9STRA3.470e-4949.47Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A059WZ24_9BACT4.440e-4945.37Dihydrofolate reductase n=1 Tax=uncultured bacteri... [more]
A0A7S2MDM9_9STRA3.930e-4750.30Bifunctional dihydrofolate reductase-thymidylate s... [more]
F0YJX9_AURAN4.920e-4750.55Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S2MDD2_9STRA3.020e-4651.28Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7R9UC25_9STRA3.610e-4447.92Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A059WZL2_9BACT2.610e-4345.31Dihydrofolate reductase n=1 Tax=uncultured bacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00070DHFRcoord: 13..23
score: 57.38
coord: 52..63
score: 65.48
coord: 27..35
score: 45.31
coord: 117..131
score: 45.8
NoneNo IPR availablePANTHERPTHR22778OVARIAN CANCER GENE-2 PROTEIN-RELATEDcoord: 3..189
IPR024072Dihydrofolate reductase-like domain superfamilyGENE3D3.40.430.10coord: 2..190
e-value: 4.2E-58
score: 198.4
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 2..189
IPR001796Dihydrofolate reductase domainPFAMPF00186DHFR_1coord: 2..189
e-value: 5.1E-34
score: 117.3
IPR001796Dihydrofolate reductase domainPROSITEPS51330DHFR_2coord: 1..189
score: 44.859
IPR012259Dihydrofolate reductasePANTHERPTHR22778:SF16DIHYDROFOLATE REDUCTASEcoord: 3..189
IPR017925Dihydrofolate reductase conserved sitePROSITEPS00075DHFR_1coord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135003contigH-elongata_contig135003:993..1619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135003.2471.1mRNA_H-elongata_contig135003.2471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135003 993..1619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135003.2471.1 ID=prot_H-elongata_contig135003.2471.1|Name=mRNA_H-elongata_contig135003.2471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
FIVIVAATAGSLGIGKNGTLPWRLAADMAYFKRCTSTPSTSGADDADKVN
AVIMGRKTWQSIPKRFRPLEGRRNIILSRNPRAREDLSLPPSVLLAGSLA
EALSLLARPPHTTEVDKVFVIGGSSVYAEALTYTLCEKILLTSVRAGDGR
FDDCDVHFPALKPEAFKLVKKGRVQEEKGTEFSFDEYERVPDSSAVGVTV
TVPTQTLSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024072DHFR-like_dom_sf
IPR001796DHFR_dom
IPR012259DHFR
IPR017925DHFR_CS