prot_H-elongata_contig135003.2470.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135003.2470.1
Unique Nameprot_H-elongata_contig135003.2470.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.570e-48
Identity = 92/136 (67.65%), Postives = 109/136 (80.15%), Query Frame = 0
Query:   27 VIYVSEGINTGLLEDLANAASDQAG--AGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLG-LGSEDAARQTGMTIARSLGTD-GLPVLLYGELTENGRGLAEV 158
            V+YVSEG N+ LL+ LA AA   A   AGL+RQFRDP YHRTGFTIGG  P +VA AS+EVSRRA+R+IDL EHEA+HPRIGVVDH+SVHPLG  GS++ A++ G+ IA +LG D GLPVLLYG+L  NGR LAEV
Sbjct:   38 VVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLN-NGRRLAEV 172          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A7S0PKG3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PKG3_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 8.230e-29
Identity = 63/141 (44.68%), Postives = 85/141 (60.28%), Query Frame = 0
Query:   21 RNAVLTVIYVSEGINTGLL---EDLANAASDQAGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGTDGLPVLLYGELTENGRGLAEV 158
            R A+  V+YVSEG N  +L   E +A  AS      L+  FRD  Y+RTGFT  GR  + V  +++EV+  +LR +DLREH A+HPR+GVVDH+S H L  G    A +    I   LG+ G+PV LYG+   +G GL E+
Sbjct:    6 RAALAAVVYVSEGRNAVVLDKIEAIARKASTTRPVALVNIFRDVEYNRTGFTFAGRDANDVTRSALEVASASLRVVDLREHAATHPRVGVVDHVSCHALDAGRRADAAELAREIGAGLGSFGVPVKLYGDAASDGVGLDEI 146          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO)

HSP 1 Score: 113 bits (282), Expect = 1.940e-27
Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQAGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSE-DAARQTGMTIARSLGTDGL--PVLLYGELTENGRGLAEV 158
            +Y+SEG    LLE L   AS   G  L+  F D  Y+RTGFT+    P  +A  ++ ++R AL +IDLR H ASHPR+GVVDHIS HPLG G+   +A +    I   LG   L  PV LYG   +N + LA++
Sbjct:   15 VYISEGSKLALLEQLKGVASTDTGTALVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADI 148          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A4S2F9_OSTLU (FTCD_N domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S2F9_OSTLU)

HSP 1 Score: 111 bits (277), Expect = 1.490e-26
Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 0
Query:   21 RNAVLTVIYVSEGINTGLLEDLANAASDQAG----AGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGTDGLPVLLYGELTENGRGLAEV 158
            + A   V+YVSEG  T +L+ +   A +         L+  FRD  Y+RTGFT+ GR    V  A+++V++ +LR +D+R H+A+HPR+GVVDH+S H L  G    A +   +I   LGT G+PV LYG+   +G GL E+
Sbjct:    9 QRAFAAVVYVSEGRRTAVLDVIERVAREATAPRRPVALVNVFRDAEYNRTGFTLAGRDVDDVRRAALDVAQVSLREVDMRAHDATHPRVGVVDHVSCHALA-GERAGAAKLAKSIGEGLGTLGVPVKLYGDAASDGIGLDEI 149          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE)

HSP 1 Score: 108 bits (269), Expect = 8.490e-26
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQAGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLG-LGSEDAARQTGMTIARSLGTD----GLPVLLYGELTENGRGLAEV 158
            +Y+SEG +  L+  L  AA    G  L+  F+D  YHRTGFT+    P  + EA + +SR AL+ +DLR H+ASHPR+GVVDHI++HPLG L    A    G+    + G +     LPV  YG    + RGLA++
Sbjct:    3 VYISEGRDKALIGKLEAAAQATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADI 138          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A090N402_OSTTA (Formiminotransferas, N-and C-terminal subdomains n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N402_OSTTA)

HSP 1 Score: 107 bits (266), Expect = 7.820e-25
Identity = 55/140 (39.29%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   22 NAVLTVIYVSEGINTGLLEDLANAASDQA---GAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGTDGLPVLLYGELTENGRGLAEV 158
             A+  V+YVSEG  T +L+ +   A D +      L+  F D  Y+RTGFT+ G +   +A  ++++++++L  ID   H+A+HPR+GVVDH+S H L  G  DA       I R LG  G+PV LYG+   +  GLAE+
Sbjct:   28 RALAAVVYVSEGRRTVVLDAIERVARDASLKNRVALVNVFVDREYNRTGFTLAGAHTDGIANTALDIAKKSLELIDFSTHDATHPRLGVVDHVSCHEL-RGERDAGAALARNIGRGLGDQGVPVKLYGDAASDKVGLAEI 166          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC)

HSP 1 Score: 103 bits (258), Expect = 6.450e-24
Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQ-AGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGTD------GLPVLLYGELTENGRGLAEV 158
            +Y+SEG+ + L++ L   A    +G+ L+  F D  Y+RTGFT+    P  +A + + ++R AL +IDLR H ASHPR+GVVDHIS HPLG    DAA       ARS+GT        +PV LYG      R LA++
Sbjct:   10 VYISEGLRSTLVQQLKVCADKCISGSALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLG---RDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADL 144          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK)

HSP 1 Score: 103 bits (258), Expect = 1.170e-23
Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQAG----AGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLG---LGSEDAARQTGMTIARSLGTD-GLPVLLYGELTENGRGLAEV 158
            +YVSEG +   + +L   A ++ G      L+ +F DP Y+RT F   G Y SSV+    EV+  A+ S++L EHEASHPRIGVVDHISVHPLG   + +E+AAR+ G       GT+ G+P+L YG L  NG+ L+ V
Sbjct:   57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGETMVFAEEAAREIGAYF----GTEKGIPILFYGSL--NGKRLSAV 188          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 6.210e-23
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQAGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGT------DGLPVLLYGELTENGRGLAEV 158
            +Y SEG N  LL+ L    S + G  L+ +F D  Y+R+ FT+        A A+ E+++ A+ ++DLR HEASHPR+GVVDHIS HPL   +  AA +    +ARS+G+         PV LYG     GR LA++
Sbjct:    2 VYXSEGXNVKLLKTLEQLVSGRNGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPL---TAAAAMEDAAALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADL 135          
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Match: A0A835T8Z5_CHLIN (FTCD_N domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T8Z5_CHLIN)

HSP 1 Score: 100 bits (250), Expect = 3.230e-22
Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = 0
Query:   28 IYVSEGINTGLLEDLANAASDQAGAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEASHPRIGVVDHISVHPLGLGSEDAARQTGMTIARS 134
            +Y+SEG +  L+  L  AA    G  L+  F+D  YHRTGFT+    P  + EA + +SR AL+ +DLR H+ASHPR+GVVDHI++HPLG  +  AA Q G   A S
Sbjct:   18 VYISEGRDKALIGKLETAAQATPGVALVHVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAAVQYGAAPATS 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135003.2470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA3_ECTSI2.570e-4867.65FTCD_N domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S0PKG3_9CHLO8.230e-2944.68Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A8J9WP56_9CHLO1.940e-2744.78Probable formimidoyltransferase-cyclodeaminase n=1... [more]
A4S2F9_OSTLU1.490e-2640.85FTCD_N domain-containing protein n=1 Tax=Ostreococ... [more]
A8HWL3_CHLRE8.490e-2642.65Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A090N402_OSTTA7.820e-2539.29Formiminotransferas, N-and C-terminal subdomains n... [more]
I0YZZ2_COCSC6.450e-2442.75Formiminotransferase n=1 Tax=Coccomyxa subellipsoi... [more]
A0A7S3XW83_HETAK1.170e-2346.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A061R7T0_9CHLO6.210e-2340.88Formimidoyltransferase-cyclodeaminase-like isoform... [more]
A0A835T8Z5_CHLIN3.230e-2247.66FTCD_N domain-containing protein n=1 Tax=Chlamydom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012886Formiminotransferase, N-terminal subdomainSMARTSM01222FTCD_N_2coord: 22..159
e-value: 7.5E-9
score: 36.2
IPR012886Formiminotransferase, N-terminal subdomainPFAMPF07837FTCD_Ncoord: 24..157
e-value: 5.1E-31
score: 107.8
IPR037064Formiminotransferase, N-terminal subdomain superfamilyGENE3D3.30.990.10coord: 21..158
e-value: 1.8E-33
score: 117.7
NoneNo IPR availablePANTHERPTHR12234:SF1FORMIMINOTRANSFERASE N-TERMINAL SUBDOMAIN-CONTAINING PROTEINcoord: 25..158
NoneNo IPR availablePANTHERPTHR12234FORMIMINOTRANSFERASE-CYCLODEAMINASEcoord: 25..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
IPR022384Formiminotransferase catalytic domain superfamilySUPERFAMILY55116Formiminotransferase domain of formiminotransferase-cyclodeaminase.coord: 24..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135003contigH-elongata_contig135003:224..703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135003.2470.1mRNA_H-elongata_contig135003.2470.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135003 224..730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135003.2470.1 ID=prot_H-elongata_contig135003.2470.1|Name=mRNA_H-elongata_contig135003.2470.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MLLARRVVLAGAACAETVVPRNAVLTVIYVSEGINTGLLEDLANAASDQA
GAGLLRQFRDPIYHRTGFTIGGRYPSSVAEASIEVSRRALRSIDLREHEA
SHPRIGVVDHISVHPLGLGSEDAARQTGMTIARSLGTDGLPVLLYGELTE
NGRGLAEVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012886Formiminotransferase_N
IPR037064Formiminotransferase_N_sf
IPR022384FormiminoTrfase_cat_dom_sf