prot_H-elongata_contig134945.2467.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134945.2467.1
Unique Nameprot_H-elongata_contig134945.2467.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 200 bits (508), Expect = 3.400e-55
Identity = 106/235 (45.11%), Postives = 136/235 (57.87%), Query Frame = 0
Query:    1 LIPSDAAPRNEITLSILRDKHPREDPAAIAEAKARAAKYVHEPPKGTPLPIAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQDVRDDDLEVEIARLSRTVFKSETLPPLVWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAVSLGFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYARDLPKLL 235
            L+   + PRN  TL  LR KHP E    IAEA   A   +  PP G    I  +++PF    +   IR+ NPQ +PGPS LR   LQ     +L   IA+L   +F    LP   W LHT ANLSA+G K RP+A GD+FRRI+G   C  Y   L  HFEP+GQ+GVA PGG +L+A    L   +G  +L++D +  F+S+ R A LPAL  +IP    YATN+YAR+ PKLL
Sbjct: 1102 LLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSR-IEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLL 1335          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A812N9S6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N9S6_9DINO)

HSP 1 Score: 72.8 bits (177), Expect = 3.440e-11
Identity = 67/243 (27.57%), Postives = 99/243 (40.74%), Query Frame = 0
Query:    1 LIPSDAAPRNEITLSILRDKHPREDPAAIAEAKARAAKYVHEPPKGTPLPIAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQD----VRDDDLEVEIARLSRTVFKSETLPPLVWALH-TGANLSALGAK---ARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAV-----SLGFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYARD 230
            L+     PR+  TL+ L+ KHP+     +A               G P P A  +  F   A+  A+R     SAPGPS LR  HL++       D++ V +A L   + + E   P   A H  GA L AL       RP+A G+V RR++G   C    +       P  Q GV  P G +    A      S    E   ++  D +  F+++ R + L      +P  S +A   Y + 
Sbjct:  136 LLQEPPLPRDAATLAALQAKHPQSPLPDLAAL-------------GAPRPGAVPE--FSAEAVAKAVRSFKRASAPGPSGLRPDHLRESLSTAHADEVAVHLAALCHLLARGEA--PATLAPHLAGATLHALPKPQGGVRPIAIGEVLRRLVGKLLCGSVREAARDQLWPL-QVGVGVPSGSEAAVHAARHWLQSHSGHENRVLVKLDFRNAFNAVSRASVLREARARVPEVSSWADWCYGQS 360          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A812KQM1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KQM1_9DINO)

HSP 1 Score: 72.4 bits (176), Expect = 5.270e-11
Identity = 67/243 (27.57%), Postives = 99/243 (40.74%), Query Frame = 0
Query:    1 LIPSDAAPRNEITLSILRDKHPREDPAAIAEAKARAAKYVHEPPKGTPLPIAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQD----VRDDDLEVEIARLSRTVFKSETLPPLVWALH-TGANLSALGAK---ARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAV-----SLGFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYARD 230
            L+     PR+  TL+ L+ KHP+     +A               G P P A  +  F   A+  A+R     SAPGPS LR  HL++       D++ V +A L   + + E   P   A H  GA L AL       RP+A G+V RR++G   C    +       P  Q GV  P G +    A      S    E   ++  D +  F+++ R + L      +P  S +A   Y + 
Sbjct:  203 LLQEPPLPRDAATLAALQAKHPQSPLPDLAAL-------------GAPRPGAVPE--FSAEAVAKAVRSFKRASAPGPSGLRPDHLRESLSTAHADEVAVHLAALCHLLGRGEA--PATLAPHLAGATLHALPKPQGGVRPIAIGEVLRRLVGKLLCGSVREAARDQLWPL-QVGVGVPSGSEAAVHAARHWLQSHSGHENRVLVKLDFRNAFNAVSRTSVLREARARVPEVSSWADWCYGQS 427          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A1Q9DL84_SYMMI (132 kDa protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DL84_SYMMI)

HSP 1 Score: 61.2 bits (147), Expect = 3.540e-7
Identity = 53/199 (26.63%), Postives = 85/199 (42.71%), Query Frame = 0
Query:   43 PPKGTPLPIAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQDV----RDDDLEVEIARLSRTVFKSETLPPLVWALHTGANLSAL---GAKARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAV---SLGFAEGCT--ILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYAR 229
            PP   PL    +     P  +  ++R    ++APGP+ LR  HL+D       +    ++A + + + +    P  V  +  GA L AL       RP+A G++FRR+ G    +   ++   HF P  Q GVA  GG +    AV   +   A   T  ++  D    F+ I R A L    T  P  + ++   Y +
Sbjct:  405 PPSDRPLQSLPLAPDIAPELVARSLRAFPAETAPGPTGLRVQHLRDACTAGSRESFLTQLAAVVQLLAQGRA-PSFVAPVLAGAGLVALPKPSGGVRPIAVGEIFRRLTGKCLMALVQQEARTHFWPA-QVGVAVKGGAEKAVHAVRAWAQRHAGSATKALVKLDFTNAFNCISREAVLQQACTDFPALARWSVWCYRQ 601          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A433BTR1_9BURK (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A433BTR1_9BURK)

HSP 1 Score: 58.9 bits (141), Expect = 1.650e-6
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:  121 GANLSAL---GAKARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVD---LMARAVSLGFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLY 227
            GA L AL   G   RP+ACGDVFRRI       + S++L+       Q GV  P G +   L AR  +   +E   +L  D K  F++I R++F+  +++ +P    +    Y
Sbjct:   35 GARLFALQKAGGGIRPIACGDVFRRIAARILAGNASRQLSPFLFSNRQVGVQAPCGAEAAQLAARRFAAAASEEDVVLKLDFKNAFNTIARQSFVEGVSSRVPALLPHVWAAY 147          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A813HER3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HER3_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 2.580e-6
Identity = 53/194 (27.32%), Postives = 80/194 (41.24%), Query Frame = 0
Query:   49 LPIAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQDV-----RDDDLEVEIARLSRTVFKSETLPPLVWALHTGANLSALGAKA---RPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAVSLGFAEGCT-----ILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYAR 229
            LP+A +        +   +     +SAPGPS LR  HL +      R   LE ++  + + + + E  P  V     GA L A+       RP+A G+V RRI+G   C+   ++    F P  Q GVACP G+D   R+         T     +L  D    F  + R   L       P  + ++   Y+R
Sbjct:   63 LPLAAV---IGQEVVSKVLHSFPQESAPGPSSLRVQHLLEGLTPAHRAAVLE-QLTAVVQLLVRGEA-PEAVAPTLAGAGLFAMPKATGGVRPIAIGEVLRRIVGKCLCASVKEEAKRFFHPS-QVGVACPTGIDAAVRSARAWKNRSATDTSKALLKLDFANAFHCVSRSQVLEQTRRHFPSLARWSQWCYSR 250          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A6P7U4Z7_OCTVU (uncharacterized protein LOC115229886 n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7U4Z7_OCTVU)

HSP 1 Score: 56.6 bits (135), Expect = 1.190e-5
Identity = 50/175 (28.57%), Postives = 76/175 (43.43%), Query Frame = 0
Query:   66 AIRKVNPQSAPGPSVLRHCHLQDVRDDDLEVEIARLSRTV------FKSETLPPLVWALHTGANLSALGAK---ARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAV---SLGFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYA 228
            A+R  +P S+ G   LR  HL+D+          +L R++      F S ++P     +   ANL+ALG K    RP+A G++FRR+     C      L+  F P  Q GV  P G +    ++   +  F E   ++  D    F+SI R   L     ++  A      LYA
Sbjct:  499 ALRDFSPGSSGGVDGLRPGHLKDLTSPTTAEASRKLLRSITNLCNRFISGSIPDFARDIFFSANLTALGKKDNGVRPIAVGNIFRRLSAKLLCRAIVPCLSSKFLPV-QLGVGVPNGCEAAVHSIRDLTESFEE-FIVVKLDVSNAFNSIRRDHLLECCRELVLFAYPLVHLLYA 671          
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Match: A0A813DQF9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DQF9_POLGL)

HSP 1 Score: 55.5 bits (132), Expect = 2.760e-5
Identity = 54/182 (29.67%), Postives = 77/182 (42.31%), Query Frame = 0
Query:   63 IGDAIRKVNPQSAPGPSVLRHCHLQDVRDDDLEVEIARLSRTVFK--SETLPPLVWALH-TGANLSALGAK---ARPVACGDVFRRIIGATFCSDYSKKLTGHFEPKGQHGVACPGGVDLMARAVSL-------GFAEGCTILSFDGKKVFSSIYRRAFLPALTTVIPVASGYATNLYARDL 231
            +   +R     SA GPS LR  HL D R  D    +      V    +  + P   A H  GA+L AL       RP+A G+V RRI G   CS   +     F+P  Q GVACP GVD   ++            A+G  ++  D +  F+ + R A L  +    P  + +A     ++L
Sbjct:   10 VDKVLRSFPLDSAAGPSGLRVQHLLDARTSDQGNSMIEQQAEVVHLLARGMAPHDLAQHLAGASLMALDKPHRGVRPIASGEVLRRITGKCLCSVVKETAQTFFKPS-QVGVACPFGVDAAIQSCRAWTQREHGNRAKG--LVKLDFRSAFNCVDRGAALRQIRHNFPELARWAQWCVMQNL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134945.2467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN3.400e-5545.11Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A812N9S6_9DINO3.440e-1127.57Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812KQM1_9DINO5.270e-1127.57Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A1Q9DL84_SYMMI3.540e-726.63132 kDa protein n=2 Tax=Symbiodinium microadriatic... [more]
A0A433BTR1_9BURK1.650e-632.74Reverse transcriptase domain-containing protein (F... [more]
A0A813HER3_POLGL2.580e-627.32Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6P7U4Z7_OCTVU1.190e-528.57uncharacterized protein LOC115229886 n=1 Tax=Octop... [more]
A0A813DQF9_POLGL2.760e-529.67Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134945contigH-elongata_contig134945:109..813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134945.2467.1mRNA_H-elongata_contig134945.2467.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134945 109..813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134945.2467.1 ID=prot_H-elongata_contig134945.2467.1|Name=mRNA_H-elongata_contig134945.2467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
LIPSDAAPRNEITLSILRDKHPREDPAAIAEAKARAAKYVHEPPKGTPLP
IAEIDQPFEPSAIGDAIRKVNPQSAPGPSVLRHCHLQDVRDDDLEVEIAR
LSRTVFKSETLPPLVWALHTGANLSALGAKARPVACGDVFRRIIGATFCS
DYSKKLTGHFEPKGQHGVACPGGVDLMARAVSLGFAEGCTILSFDGKKVF
SSIYRRAFLPALTTVIPVASGYATNLYARDLPKLL
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