prot_H-elongata_contig13465.2454.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13465.2454.1
Unique Nameprot_H-elongata_contig13465.2454.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 3.120e-94
Identity = 136/169 (80.47%), Postives = 158/169 (93.49%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 169
            MDDPA+APWRL+AE+I+R+QV+ CGLTCYDILWTFHRLEVTVTRA  DGPIE++AYVDSDKLM+AIK VN ALE REEELFVLGRHEL+VATPG+KDVLTT+K+FKA+KGF++IVK GGPFK KR+L GKLLERTFDEL+I ++GR VR+PLALVDEVRLPPALVE+GD
Sbjct:  191 MDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 359          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.650e-69
Identity = 110/171 (64.33%), Postives = 138/171 (80.70%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRA--PDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 169
            MDDP +APWR +AE IIR +V+  GL CYDI+W+FH+LEVTVTR   P+D   E++ YVDSD LM+AI+ VN ALE+ EE L+VLGRHELI+ATPG+KD+LTT++EFKAFKGFD++V TG     +R++ GKL ERTFDELV+ Q GR VR+PLALVDEVRLP A +E G+
Sbjct:  201 MDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDS--EEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.190e-33
Identity = 72/185 (38.92%), Postives = 105/185 (56.76%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIE-------DSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLH---GKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGDTSILSK 175
            MDDP +APWRL+AE +IR  V   G   YD+ W  H + V +TR  D G +E       D+  + SD+++E  + V  AL   +  L VL R  L V TPG+KDVLTT +EF+AF+G+++ V    P       +   G+LLER     ++N  G+ V +P  +V EVRLP A+ E+ D  ++ +
Sbjct:  127 MDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQ-DGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMDE 310          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.640e-32
Identity = 70/166 (42.17%), Postives = 103/166 (62.05%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVK-ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGP--FKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPA 163
            +DDP +  WRLKAE ++R  V+ + G+  YD+ W    L+V + +  D+G   D   V++     A + +  ALE  +EEL +L RHEL V++ G+K++L + +EF+AFKGFD++VKT  P     +  L+GKL+ R   E  IN  GR VR+P  LV+EVRLP A
Sbjct:  129 LDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.020e-32
Identity = 71/185 (38.38%), Postives = 104/185 (56.22%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIE-------DSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLH---GKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGDTSILSK 175
            MDDP +APWRL AE +IR  V   G   YD+ W  H + V +TR  D G +E       D+  + SD+++E  + V  AL   +  L +L R  L V TPG+KDVLTT +EF+AF+G+++ V    P       +   G+LLER     ++N  G+ V +P  +V EVRLP A+ E+ D  ++ +
Sbjct:  237 MDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQ-DVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMEE 420          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.190e-26
Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 0
Query:   14 ERIIREQVK-ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGP--FKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPA 163
            + ++R  V+ + G+  YD+ W    L+V + +  D+G   D   V++     A + +  ALE  +EEL +L RHEL V++ G+K++L + +EF+AFKGFD++VKT  P     +  L+GKL+ R   E  IN  GR VR+P  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 105 bits (263), Expect = 4.280e-26
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 0
Query:   52 EDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESG 168
            + +  VD+ K+    K +   L+ +E  L +L RHELI+ATPG+ D L T ++F A++GFD+IV+T  PF + R L GKL+ER   +L+I + GR V +PL  V  VRLPPA  E G
Sbjct:   13 DGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.170e-25
Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 0
Query:    1 MDDPAEAPWRLKAERIIREQVK--ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKR-VNTALEEREEEL---FVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNK-------RQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 169
            MDDP +APWRL+A   I E VK         D+LW F  +++TVT      P ED+    S  ++E + R ++  L   E EL     L  H L V TPG+ +V+TT ++F+A+KGF + V T G  K+        + L G L  RT +E+ +NQ GR V+VP+A+V EVRLP   +E+GD
Sbjct:  101 MDDPLDAPWRLEAAAEIEELVKEKYPDAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGD 276          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S4CJH8_9EUGL (Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CJH8_9EUGL)

HSP 1 Score: 108 bits (271), Expect = 2.490e-24
Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   10 RLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGDTSI 172
            ++  ER I   ++ CG+  YD+ W   R+EV V+  P     E     DS+ L +AI+ V   L    +   ++ ++EL +ATPG+ DVL T+KEF A+KGF ++V T  P K K +  G L+ R  + + +N  GR ++VP  LV EV LPP   E GD+ +
Sbjct:  344 KVDMERTIEASLRQCGVYLYDLSWVNDRIEVIVSTHPPQHAPEGP---DSEVLEQAIRAVREQLWASPQMEAMMEKYELSIATPGASDVLRTDKEFVAWKGFPVVVTTTQPHKKKTKFEGNLVRRDDEFVHLNLKGRPIKVPRELVAEVSLPPPKYEKGDSEM 503          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 102 bits (254), Expect = 9.650e-24
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 0
Query:    2 DDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVT--------------------------RAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREE-ELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVP 151
            DDP +APWR++ E+IIR+  +  G    D+ W      VT++                          R   D  + + A VD   +      +  AL+E E+ +L VL RHE+IV +PG  +VL T ++F AFKGFD+IV+T  P  + R+L GKLLERT  +  I Q G+ V +P
Sbjct:   48 DDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDA-VDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI3.120e-9480.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA2.650e-6964.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA1.190e-3338.92Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SW06_9STRA1.640e-3242.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TJE5_9STRA6.020e-3238.38Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SV25_9STRA2.190e-2639.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1DE94_CYCTE4.280e-2645.30Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA1.170e-2540.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4CJH8_9EUGL2.490e-2437.42Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gy... [more]
A0A7S2PI76_9STRA9.650e-2435.59Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 99..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13465contigH-elongata_contig13465:6477..8135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13465.2454.1mRNA_H-elongata_contig13465.2454.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13465 5916..8168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13465.2454.1 ID=prot_H-elongata_contig13465.2454.1|Name=mRNA_H-elongata_contig13465.2454.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGP
IEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLT
TNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRV
PLALVDEVRLPPALVESGDTSILSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf