prot_H-elongata_contig13459.2451.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13459.2451.1
Unique Nameprot_H-elongata_contig13459.2451.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: A0A6H5KBM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM7_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.050e-26
Identity = 45/77 (58.44%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 VLQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            + Q+D+ G ++ VTW+P +EGVLM   +D+ PYY AYR FQ+++EEG YA+ +TVR +LKPGQC+VFNNRR++HGRE
Sbjct:  360 IFQLDANGELLAVTWAPMFEGVLMCQPQDVVPYYLAYREFQRLVEEGPYAESHTVRQRLKPGQCLVFNNRRMLHGRE 436          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: A0A836C7R7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.380e-23
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            ++VD+ G I  V W+P +EG L  P +D+ PYYEAY  FQ  +E G +A+E+TVR +++PGQCMVFNNRR++HGRE
Sbjct:  336 IEVDTDGEITGVFWAPMFEGTLHVPSKDIQPYYEAYALFQAFLEVGDFAEEHTVRARMQPGQCMVFNNRRMLHGRE 411          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: A0A7M7PNN2_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PNN2_STRPU)

HSP 1 Score: 75.9 bits (185), Expect = 2.450e-14
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGR 76
            + V+  G I  VTWSP +EG L  P+ED+ PYYEAYR F   +E       Y    +L+ G C++FNNRR+ HGR
Sbjct:  351 INVNRTGQITAVTWSPPFEGPLAVPEEDVEPYYEAYREFSTQLETSNKVVSY----RLQQGDCVIFNNRRIFHGR 421          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: UPI0009E5F633 (uncharacterized protein LOC110062660 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5F633)

HSP 1 Score: 74.3 bits (181), Expect = 2.960e-14
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   10 IVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            IV V WSPA+EG L  P+ED+ PY+EAYR F K+++E           K++PG  + FNNRR++HGR+
Sbjct:  150 IVAVNWSPAFEGTLSVPEEDVEPYFEAYRTFTKLLDESPMQKS----VKMQPGDLVCFNNRRVLHGRK 213          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: UPI001BB1DFF5 (probable gamma-butyrobetaine dioxygenase n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1DFF5)

HSP 1 Score: 74.7 bits (182), Expect = 6.300e-14
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    8 GAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGR 76
            G I  VTWSP +EG L  P+ED+ PYY+AYR F   +E      +  V  +L+ G C++FNNRR++HGR
Sbjct:  362 GQITAVTWSPPFEGPLFVPEEDVEPYYQAYREFSNQLE----TSDKVVSYRLQEGDCVIFNNRRILHGR 426          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: K0RW86_THAOC (TauD domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RW86_THAOC)

HSP 1 Score: 73.6 bits (179), Expect = 1.660e-13
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0
Query:    6 SGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEG------------------AYADEYTVRTKLKPGQCMVFNNRRLVHGR 76
            S G IV+V WSP +EG    P + +G YYEAY  F++M+  G                   YA EYT + KL+PG+ +VFNNRR++HGR
Sbjct:  493 SDGEIVSVFWSPPFEGPARLPADSVGRYYEAYADFERMLGGGDAAGPDGADGGGGGDELSGYAREYTWQYKLRPGEMLVFNNRRMLHGR 581          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: UPI00077B1C4A (gamma-butyrobetaine dioxygenase-like isoform X3 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B1C4A)

HSP 1 Score: 72.0 bits (175), Expect = 2.210e-13
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            + ++S   IV V WSPA+EG L+ P+ED+ PY++AYR F KM+ +           K+ PG  + FNNRR++HGR+
Sbjct:  143 IVLNSEKEIVAVIWSPAFEGPLLVPEEDVEPYFKAYRTFTKMLNDSPIQKSL----KMAPGDLVCFNNRRILHGRK 214          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: UPI00077B1407 (gamma-butyrobetaine dioxygenase-like isoform X1 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B1407)

HSP 1 Score: 72.0 bits (175), Expect = 2.730e-13
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            + ++S   IV V WSPA+EG L+ P+ED+ PY++AYR F KM+ +           K+ PG  + FNNRR++HGR+
Sbjct:  143 IVLNSEKEIVAVIWSPAFEGPLLVPEEDVEPYFKAYRTFTKMLNDSPIQKSL----KMAPGDLVCFNNRRILHGRK 214          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: A0A7S0J2F9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2F9_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 3.840e-13
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGR 76
            + +D+ GA++ + WSP +EG L  P +D+ PYY AYR  Q+ I+    A ++T R  L PG+ +VFNNRR++HGR
Sbjct:  145 ISLDATGALIGLFWSPPFEGPLRVPVDDIPPYYRAYRQLQRTIDS---APQWTHR--LAPGEVLVFNNRRMLHGR 214          
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Match: UPI001CF2EB54 (gamma-butyrobetaine dioxygenase-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2EB54)

HSP 1 Score: 72.0 bits (175), Expect = 5.450e-13
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 LQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYADEYTVRTKLKPGQCMVFNNRRLVHGRE 77
            + ++S   IV V WSPA+EG L+ P+ED+ PY++AYR F KM+ +           K+ PG  + FNNRR++HGR+
Sbjct:  313 IVLNSEKEIVAVIWSPAFEGPLLVPEEDVEPYFKAYRTFTKMLNDSPIQKSL----KMAPGDLVCFNNRRILHGRK 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13459.2451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBM7_9PHAE2.050e-2658.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7R7_9STRA5.380e-2355.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7M7PNN2_STRPU2.450e-1446.67Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
UPI0009E5F6332.960e-1448.53uncharacterized protein LOC110062660 n=1 Tax=Orbic... [more]
UPI001BB1DFF56.300e-1447.83probable gamma-butyrobetaine dioxygenase n=1 Tax=L... [more]
K0RW86_THAOC1.660e-1342.70TauD domain-containing protein (Fragment) n=1 Tax=... [more]
UPI00077B1C4A2.210e-1343.42gamma-butyrobetaine dioxygenase-like isoform X3 n=... [more]
UPI00077B14072.730e-1343.42gamma-butyrobetaine dioxygenase-like isoform X1 n=... [more]
A0A7S0J2F9_9EUKA3.840e-1345.33Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
UPI001CF2EB545.450e-1343.42gamma-butyrobetaine dioxygenase-like n=1 Tax=Acrop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042098Taurine dioxygenase TauD-like superfamilyGENE3D3.60.130.10coord: 1..77
e-value: 2.9E-14
score: 55.1
IPR003819TauD/TfdA-like domainPFAMPF02668TauDcoord: 34..77
e-value: 6.8E-9
score: 35.9
NoneNo IPR availablePANTHERPTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDcoord: 7..77
NoneNo IPR availablePANTHERPTHR10696:SF25OXIDOREDUCTASE AIM17-RELATEDcoord: 7..77
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 33..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13459contigH-elongata_contig13459:630..860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13459.2451.1mRNA_H-elongata_contig13459.2451.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13459 630..860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13459.2451.1 ID=prot_H-elongata_contig13459.2451.1|Name=mRNA_H-elongata_contig13459.2451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
VLQVDSGGAIVTVTWSPAYEGVLMSPQEDLGPYYEAYRAFQKMIEEGAYA
DEYTVRTKLKPGQCMVFNNRRLVHGRE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042098TauD-like_sf
IPR003819TauD/TfdA-like