prot_H-elongata_contig134203.2426.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134203.2426.1
Unique Nameprot_H-elongata_contig134203.2426.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length36
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134203.2426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..36
e-value: 1.3E-7
score: 31.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..36
score: 9.684
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..36
e-value: 2.1E-8
score: 36.0
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134203contigH-elongata_contig134203:1479..1586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134203.2426.1mRNA_H-elongata_contig134203.2426.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134203 1452..1586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134203.2426.1 ID=prot_H-elongata_contig134203.2426.1|Name=mRNA_H-elongata_contig134203.2426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
MDVDTVKTKLKNSRYPHVEALFSDILLVYQNAVRYY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf