prot_H-elongata_contig134095.2420.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134095.2420.1
Unique Nameprot_H-elongata_contig134095.2420.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length291
Homology
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BLAST of mRNA_H-elongata_contig134095.2420.1 vs. uniprot
Match: A0A6H5KFQ5_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFQ5_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.300e-12
Identity = 67/158 (42.41%), Postives = 74/158 (46.84%), Query Frame = 0 
Query:  137 LVHRRIRRGKTHRHTPLGDCAQEKASGNLEMSSNGGSTAALGGAIVAGAEDDFLQARPGGYRGSGSGSHRYRVAEAGVGTDGGSNAQAVTVLGTL-------GEEDXXXXXXEVVEVDFGVSNNDASAAAPMGR--LSKIFGRGRTGFTAFRDGEESG 285
            LV RRIRRG+ HRHT             LEM   GG     GG +V GAEDDFLQA PGGYR +GSGSHRYRVA                            GE D      + VEVDFGVS   A +  P G   L ++FGR   GF A  D    G
Sbjct:  590 LVVRRIRRGE-HRHT------------KLEMGRAGG-----GGKVVEGAEDDFLQAGPGGYRDNGSGSHRYRVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGELD------DEVEVDFGVSRATAGSGTPSGGGPLGRMFGRPGEGFAALGDDHRQG 723
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134095.2420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFQ5_9PHAE1.300e-1242.41Peptidase A1 domain-containing protein n=2 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10coord: 1..72
e-value: 5.7E-7
score: 30.7
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 1..32
IPR033121Peptidase family A1 domainPFAMPF00026Aspcoord: 1..26
e-value: 1.3E-4
score: 21.6
IPR033121Peptidase family A1 domainPROSITEPS51767PEPTIDASE_A1coord: 1..24
score: 12.81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..112
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134095contigH-elongata_contig134095:258..1130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134095.2420.1mRNA_H-elongata_contig134095.2420.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134095 258..1130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134095.2420.1 ID=prot_H-elongata_contig134095.2420.1|Name=mRNA_H-elongata_contig134095.2420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp
ILGDSFLRTFYTAYDVEEKKVGLAKATSNRAGSTCSEDDSISASGGLSDE
DSISTSVASFDKDDDSTDTTNVRAADHEASSSSTNSTSDGDEGIQQVKDN
DTKPGQGVEESSWIAVAATTSFLTLIVLLTCCGVGVLVHRRIRRGKTHRH
TPLGDCAQEKASGNLEMSSNGGSTAALGGAIVAGAEDDFLQARPGGYRGS
GSGSHRYRVAEAGVGTDGGSNAQAVTVLGTLGEEDEEEDDDEVVEVDFGV
SNNDASAAAPMGRLSKIFGRGRTGFTAFRDGEESGSTFTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
IPR033121PEPTIDASE_A1