prot_H-elongata_contig13402.2415.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig13402.2415.1
Unique Name	prot_H-elongata_contig13402.2415.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	100

Homology

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: D7FWT5_ECTSI (Geranylgeranyl pyrophosphate synthase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT5_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 7.480e-52
Identity = 86/100 (86.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            + YSLMAGGKRVRP+LTIAACEMFGGSME AMPTAVSTEMIHTMSLIHDDLPAMDDDDLRR         GMPTCHVK+GEDIAILAGDALLSKSFEHCA
Sbjct:  145 IHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRR---------GMPTCHVKYGEDIAILAGDALLSKSFEHCA 235

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S2FLB2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLB2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 6.960e-44
Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            MRYSLMAGGKR+RP++ IAACEMFGGS ++AMPTAV+ EMIHTMSL+HDDLPAMDDDDLRR         G+PT HV +GEDIAILAGDALLS +FEHCA
Sbjct:   88 MRYSLMAGGKRIRPIMAIAACEMFGGSQDVAMPTAVAVEMIHTMSLVHDDLPAMDDDDLRR---------GVPTNHVVYGEDIAILAGDALLSTAFEHCA 178

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: F0Y0W2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0W2_AURAN)

HSP 1 Score: 150 bits (380), Expect = 1.710e-42
Identity = 76/100 (76.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            MRYSL+AGGKRVRPV+ IAACEMFGG+  MAMPTAV+ EMIHTMSLIHDDLPAMD+DDLRR         GMPT HV +G+D+AILAGDALLS SFEHCA
Sbjct:   91 MRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRR---------GMPTNHVIYGDDVAILAGDALLSTSFEHCA 181

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S2V1Y7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.050e-42
Identity = 73/100 (73.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            MRYSL+AGGKR+RP+LT+AACEMFGGS+E AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR         G PTCHV +GED AILAGDA+LS SFE+ A
Sbjct:    1 MRYSLLAGGKRIRPILTLAACEMFGGSVESAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR---------GRPTCHVVYGEDNAILAGDAMLSTSFEYVA 91

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S2RH45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH45_9STRA)

HSP 1 Score: 149 bits (376), Expect = 5.300e-42
Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            MRYSL+AGGKRVRP++ IAACEM GG+ EMAMPTAV+ EMIHTMSL+HDDLP+MD+DDLRR         G PT HV FGEDIAILAGDALLS +FEHCA
Sbjct:   82 MRYSLLAGGKRVRPIMCIAACEMLGGTQEMAMPTAVAIEMIHTMSLVHDDLPSMDNDDLRR---------GKPTNHVLFGEDIAILAGDALLSTAFEHCA 172

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S3YD71_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YD71_9EUKA)

HSP 1 Score: 147 bits (370), Expect = 9.500e-41
Identity = 75/100 (75.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            MRYSL+AGGKRVRP L IAACEM GG+ EM MP+AV+ EMIHTMSLIHDDLPAMD+DDLRR         GMPT HVK+GEDIAILAGDALLS+SF H A
Sbjct:  120 MRYSLLAGGKRVRPALCIAACEMLGGTEEMCMPSAVALEMIHTMSLIHDDLPAMDNDDLRR---------GMPTSHVKYGEDIAILAGDALLSESFAHVA 210

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: B8BXV9_THAPS (Geranylgeranyl pyrophosphate synthetase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV9_THAPS)

HSP 1 Score: 145 bits (367), Expect = 1.110e-40
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            M YSLMAGGKR+RPVL IAACEMFGGS ++AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR         G PT HV FGED+AILAGD+LLS SFEH A
Sbjct:   80 MAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR---------GKPTNHVVFGEDVAILAGDSLLSTSFEHVA 170

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S2A4A8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4A8_TRICV)

HSP 1 Score: 143 bits (360), Expect = 1.470e-40
Identity = 73/100 (73.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            M YSLMAGGKR+RPVL +AACEMFGG+ E AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR         G PT HV +GED+AILAGDALLS SFEH A
Sbjct:   84 MSYSLMAGGKRIRPVLCLAACEMFGGTEERAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR---------GKPTNHVIYGEDVAILAGDALLSTSFEHVA 174

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A7S3Q3N6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3N6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.610e-40
Identity = 73/100 (73.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            M YSLMAGGKR+RPVL IAACEMFGGS E AMPTAV+ EMIHTMSLIHDDLP+MD+DDLRR         G PT H+ +GED+AILAGDALLS SF+H A
Sbjct:   83 MDYSLMAGGKRIRPVLCIAACEMFGGSQEAAMPTAVALEMIHTMSLIHDDLPSMDNDDLRR---------GKPTNHIIYGEDVAILAGDALLSTSFQHVA 173

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BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Match: A0A835ZD72_9STRA (Farnesyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD72_9STRA)

HSP 1 Score: 142 bits (358), Expect = 9.810e-40
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:    1 MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDDLPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA 100
            M+YSLMAGGKRVRP+L IAACEMFGG+ E AMPTAV+ EMIH+MSLIHDDLPAMD+DDLRR         G PT HV +GE +AILAGDALLSKSFEH A
Sbjct:   40 MKYSLMAGGKRVRPILCIAACEMFGGTDEDAMPTAVALEMIHSMSLIHDDLPAMDNDDLRR---------GKPTNHVVYGEAMAILAGDALLSKSFEHVA 130

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot

BLAST of mRNA_H-elongata_contig13402.2415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWT5_ECTSI	7.480e-52	86.00	Geranylgeranyl pyrophosphate synthase, chloroplast...	[more]
A0A7S2FLB2_9STRA	6.960e-44	75.00	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
F0Y0W2_AURAN	1.710e-42	76.00	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S2V1Y7_9STRA	2.050e-42	73.00	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2RH45_9STRA	5.300e-42	74.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3YD71_9EUKA	9.500e-41	75.00	Hypothetical protein n=2 Tax=Lotharella globosa Ta...	[more]
B8BXV9_THAPS	1.110e-40	74.00	Geranylgeranyl pyrophosphate synthetase n=1 Tax=Th...	[more]
A0A7S2A4A8_TRICV	1.470e-40	73.00	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S3Q3N6_9STRA	6.610e-40	73.00	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A835ZD72_9STRA	9.810e-40	74.00	Farnesyltransferase n=1 Tax=Tribonema minus TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 1..100 e-value: 7.0E-41 score: 142.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 1..99
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 1..99 e-value: 6.1E-21 score: 74.6
None	No IPR available	PANTHER	PTHR43281	FAMILY NOT NAMED	coord: 1..99
None	No IPR available	PANTHER	PTHR43281:SF1	GERANYLGERANYL PYROPHOSPHATE SYNTHASE 7, CHLOROPLASTIC	coord: 1..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig13402	contig	H-elongata_contig13402:7409..7960 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig13402.2415.1	mRNA_H-elongata_contig13402.2415.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig13402 7394..7960 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig13402.2415.1 ID=prot_H-elongata_contig13402.2415.1|Name=mRNA_H-elongata_contig13402.2415.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MRYSLMAGGKRVRPVLTIAACEMFGGSMEMAMPTAVSTEMIHTMSLIHDD
LPAMDDDDLRRRGLLNSWNMGMPTCHVKFGEDIAILAGDALLSKSFEHCA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008949	Isoprenoid_synthase_dom_sf
IPR000092	Polyprenyl_synt