prot_H-elongata_contig13376.2397.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13376.2397.1
Unique Nameprot_H-elongata_contig13376.2397.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length442
Homology
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BLAST of mRNA_H-elongata_contig13376.2397.1 vs. uniprot
Match: A0A6H5KYI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYI2_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 8.640e-72
Identity = 175/434 (40.32%), Postives = 232/434 (53.46%), Query Frame = 0 
Query:   47 FWAPFGSIGAKIPDGKGTSAAE-----EPRAQTLSAFFNLDHTNFVAKSTI--GILSLTMLLGALQKALLQTKVDILKFVASHSVYECSYHQGNRFMRFFVRVFEPPSRSSGQLLDEDATIVEKIKGGL-----LVEVQLWEGDRLYFSTLYREMIMNFLRLPDEVVIMGTLCYKAKQLPEQGKGLVLKLPVKLHPWKISMKKMDE---------------GISEFQSYIPNKPLDEDMIEDVVKLVKMLDSGLLDVQADAVTTIAGLTSDAEFRDRLCHPNAQKAANALCCVSARLLVETETRPVRRQAAVTVANLSSSPKLCSSLLNSDPPLTSPKRG---------------IVDALVTLSIQRSKDA----KEEEIETRRECMRALINLAESRSARRTPAMESLLTATPAGNGANCTKLEGMLRMCREVL 434
            F+APFG  G     G  +   E      P   TL + F L+ TN V  S +   +LS+  LL AL+ AL    VD+L F  +H V ECSYH GNRF+  F+RVF+ P R+SGQL D  +        G      LVE QL EGDRL+FS L+RE++  F+   + V ++GT  YK +  P  G+GL L+  V + P + S++ + E                ++  Q    +  LD DM++DVV L  ML    LDVQADA   +AGLT+D +  ++L    A  AANA+   +ARLLVET  RP RRQAAV VANL+ +P+L ++LL SD                        +V++LV LS+ R   +     EEEI  RRECMRAL+ LAESR  R  PAM  LL+  P+G GA    L   L  CRE+L
Sbjct:  157 FFAPFGIAGNAHSSGLSSYDGELEDSDTPCVATLPSTFRLERTNLVVTSPLMEQLLSVDSLLDALRAALTDAGVDVLDFKPAHCVLECSYHVGNRFLSLFIRVFKAPDRASGQLFDNSSVGNNNNDDGAEQTPYLVEAQLREGDRLHFSALFREILRAFMN-QEGVNLVGTFRYKPRTYPATGEGLALE-QVNMAPSRNSIRLLAERGEATKTGGSLPVPASMARPQVSSSSPELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTDVKLLEQLSRGAAANAANAIAHAAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASDXXXXXXXXXXXXXXXXXXXXXXXXLVESLVVLSMGRVDGSAARKSEEEIGMRRECMRALVGLAESRVVRDMPAMRLLLSTDPSGRGAKDATLTKRLEECREIL 588
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13376.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYI2_9PHAE8.640e-7240.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 254..416
e-value: 5.8E-10
score: 40.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 261..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13376contigH-elongata_contig13376:539..4419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13376.2397.1mRNA_H-elongata_contig13376.2397.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13376 449..7047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13376.2397.1 ID=prot_H-elongata_contig13376.2397.1|Name=mRNA_H-elongata_contig13376.2397.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=442bp
MDDNVCQLESGEPFYPSEKEEKHVTSTFETLPSKPTTGEEGCSESLFWAP
FGSIGAKIPDGKGTSAAEEPRAQTLSAFFNLDHTNFVAKSTIGILSLTML
LGALQKALLQTKVDILKFVASHSVYECSYHQGNRFMRFFVRVFEPPSRSS
GQLLDEDATIVEKIKGGLLVEVQLWEGDRLYFSTLYREMIMNFLRLPDEV
VIMGTLCYKAKQLPEQGKGLVLKLPVKLHPWKISMKKMDEGISEFQSYIP
NKPLDEDMIEDVVKLVKMLDSGLLDVQADAVTTIAGLTSDAEFRDRLCHP
NAQKAANALCCVSARLLVETETRPVRRQAAVTVANLSSSPKLCSSLLNSD
PPLTSPKRGIVDALVTLSIQRSKDAKEEEIETRRECMRALINLAESRSAR
RTPAMESLLTATPAGNGANCTKLEGMLRMCREVLTRRPKLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold