prot_H-elongata_contig13374.2394.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13374.2394.1
Unique Nameprot_H-elongata_contig13374.2394.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length317
Homology
BLAST of mRNA_H-elongata_contig13374.2394.1 vs. uniprot
Match: A0A6H5JES4_9PHAE (Misat_Tub_SegII domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JES4_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 6.370e-61
Identity = 148/292 (50.68%), Postives = 177/292 (60.62%), Query Frame = 0
Query:    1 MAVDPRNAYHTSAILGAAVDVATSPLRFSSTGLDEWTSTGGSCGSGRVMSPDDGGGGI----GRAHAPGGYGSMVLASMSAWIPFPNPDASAETLRGVLDFSPSLVGASGGGRVPHVARPAGGQTGTQNGMVSFGPFARRRE-TPRRGNG---VESEAPGSARTSFGNLHVFSRKMVARGLTCPRADQLAIIRQVLGTSCVGAGSPYAVSTPLPIPISYPLLFRASLGSRGEQLLPVSTGTRRED--QGNRDHKG----------ELRVMCDEISAVACVERSSALGSYIAQ 272
            MA+DP NAYHTSA+LGAA+DVATSP+RFSSTGLD W+S  G  G G V  P  GGGG     GR   PG    M LA++SAW+P P+PDASAETL  +L    +    +G    P +A  A       + MVS GP ARRR    RRG G   V   A G  R S     V+SRK+V RG T PR  QL  + +VLG S VG+G  Y+VSTPLPIPI+YPL+FR SLG RGE L+P +  +R  +   G    KG          ELRVMCD IS VAC ER S +GS+I+Q
Sbjct:  367 MAIDPSNAYHTSAVLGAAIDVATSPVRFSSTGLDAWSSGRGD-GVGGV--PMAGGGGAFGDGGRVPPPGA--DMTLATLSAWLPLPHPDASAETLARLLSEHATSSRDAGSSDDPSLAPSA-------SKMVSLGPVARRRRGNLRRGRGKLLVPPSAAGGERVS----RVYSRKIVLRGCTAPRDHQLHALEEVLGRSAVGSGCSYSVSTPLPIPITYPLIFRESLGVRGE-LMPSAGASRAAEWASGGASGKGGGGRGAITSGELRVMCDHISGVACTERDSRMGSFISQ 641          
BLAST of mRNA_H-elongata_contig13374.2394.1 vs. uniprot
Match: A0A835Z5A4_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.530e-24
Identity = 104/327 (31.80%), Postives = 144/327 (44.04%), Query Frame = 0
Query:    1 MAVDPRNAYHTSAILGAAVDVATSPLRFSSTG----LDEWTSTGGSCGSGRVMSPDDGGGGIGRAHAPGGYG--SMVLASMSAWIPFPNPDASAETLRGVLD---FSPSLVGASGGGRVPHVARPAGGQTGTQNGMVSFGPFARRRETPRRGNGVESEAPGSARTSFGNLHVFSRKMVARGLTCPRADQLAIIRQVLGTSCVGAGSPYAVS-----TPLPIPISYPLLFRASLGSRGEQLLPVSTGTRREDQGNRDHKGELRVMCDEISAVACVERSSALGSYIAQVVE-GFDLRRGGVRLELEKNDIQRDDAIEIIESLNALAGSY 312
            +A+D R  YHTSA+LGAA++ ATSP RFSS      +D W                     +  A A GG+G  +M  A ++   PF   D + + L  +LD       L         PHV   A G +G+ +   +  PF                             VFS  +VARGL      Q  ++   L  +  G G   A +     TPLPIP+S+PL+FR SL  RG ++ P  + +  +D          RV+  E +A+A VE S  L   +    E G D+R   V  ELE+N +QRDDA E  E+L A AG+Y
Sbjct:  358 VALDARRPYHTSAVLGAALEAATSPFRFSSPAAPCRMDAW---------------------VNAALAHGGHGGANMKFAGLTLAFPFAERDGNEDALGALLDAGDLRDRLCWLGMPPPPPHVH--AAGSSGSAHAPAAL-PFT----------------------------VFSELLVARGLAPAAHLQSPLLSSALDKARQGGGXXXAAAVAAFRTPLPIPLSFPLVFRPSLDERGARVPPNHSSSGEDD----------RVLLGEAAALAGVECSGRLAPLLRGAAEAGLDVRSAAVLRELERNGLQRDDAAEAREALRAQAGAY 622          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13374.2394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JES4_9PHAE6.370e-6150.68Misat_Tub_SegII domain-containing protein n=2 Tax=... [more]
A0A835Z5A4_9STRA2.530e-2431.80Tubulin/FtsZ, GTPase domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13391MITOCHONDRIAL DISTRIBUTION REGULATOR MISATOcoord: 2..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13374contigH-elongata_contig13374:409..2251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13374.2394.1mRNA_H-elongata_contig13374.2394.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13374 388..2251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13374.2394.1 ID=prot_H-elongata_contig13374.2394.1|Name=mRNA_H-elongata_contig13374.2394.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp
MAVDPRNAYHTSAILGAAVDVATSPLRFSSTGLDEWTSTGGSCGSGRVMS
PDDGGGGIGRAHAPGGYGSMVLASMSAWIPFPNPDASAETLRGVLDFSPS
LVGASGGGRVPHVARPAGGQTGTQNGMVSFGPFARRRETPRRGNGVESEA
PGSARTSFGNLHVFSRKMVARGLTCPRADQLAIIRQVLGTSCVGAGSPYA
VSTPLPIPISYPLLFRASLGSRGEQLLPVSTGTRREDQGNRDHKGELRVM
CDEISAVACVERSSALGSYIAQVVEGFDLRRGGVRLELEKNDIQRDDAIE
IIESLNALAGSYGAGAD
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