prot_H-elongata_contig13363.2389.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13363.2389.1
Unique Nameprot_H-elongata_contig13363.2389.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A6H5KGJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.830e-42
Identity = 71/89 (79.78%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    3 VGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPERPFDE----EDEDEI 87
            V QRCEVQPG RRGVVE++GE EGL+AGYWVGVRFDEPVGRGDGTV+G+  FEC KGFGGFVRG+NV  GDFPERPFDE    EDEDEI
Sbjct:  190 VEQRCEVQPGGRRGVVEYVGEVEGLQAGYWVGVRFDEPVGRGDGTVRGKRLFECQKGFGGFVRGKNVTSGDFPERPFDELDDDEDEDEI 278          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A7S2W9K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9K5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.150e-35
Identity = 62/89 (69.66%), Postives = 70/89 (78.65%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGL--KAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPERPFDEEDEDEI 87
            +K+G RCEV PGARRG V F+GE EGL  K G+WVGV FDEPVG+ DGTVKG+  FEC  GFGGF+RGRN+ VGDFPE   D EDEDEI
Sbjct:  205 IKIGDRCEVMPGARRGTVAFVGEVEGLGSKGGHWVGVTFDEPVGKSDGTVKGQTVFECPPGFGGFIRGRNLTVGDFPEEDLDLEDEDEI 293          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A7R9UBU7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBU7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.550e-32
Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPERPF-DEEDEDEI 87
            +++GQRCEV PG RRGV+E+LG+ +GL  GYW GVRFDEPVG+GDGTVKG+  F+C   +GGF+R RNV  GDFPER   ++ DEDE+
Sbjct:  181 LELGQRCEVDPGGRRGVLEYLGKVDGLADGYWAGVRFDEPVGKGDGTVKGQRIFDCEARYGGFIRPRNVRCGDFPERDLLEDSDEDEL 268          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A7S2HN54_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HN54_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.150e-32
Identity = 55/87 (63.22%), Postives = 69/87 (79.31%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPERPFDEEDEDEI 87
            ++VG RCEV PGARRG + ++GE  GL+ G+WVGVRFDEP+G+GDGT KG  +FEC   FG FVRG+NV +GDFPE  FD++ EDEI
Sbjct:  177 LEVGGRCEVMPGARRGEIAYIGE-RGLEKGFWVGVRFDEPMGKGDGTSKGTRYFECEPSFGSFVRGKNVTMGDFPEEGFDDDSEDEI 262          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: I1J3U6_BRADI (CAP-Gly domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1J3U6_BRADI)

HSP 1 Score: 115 bits (288), Expect = 5.690e-30
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPER-PFDEEDE 84
            +KVG RCEV+PGA+RG V+F+G+AE L  G+WVGV++DEP+G+ DG VKG  FFEC +G G  VR   V VGDFPER PFDEEDE
Sbjct:  164 IKVGDRCEVEPGAKRGTVKFVGKAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVKVGDFPERDPFDEEDE 248          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: UPI0016523003 (uncharacterized protein LOC100193227 isoform X1 n=1 Tax=Zea mays TaxID=4577 RepID=UPI0016523003)

HSP 1 Score: 116 bits (291), Expect = 6.580e-30
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPER-PFDEEDEDEI 87
            +KVG RCEV+PGA+RG V+F+G AE L  G+WVGV++DEP+G+ DG VKG  FFEC +G G  VR   V VGDFPER PF++ED+DEI
Sbjct:  217 IKVGDRCEVEPGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVKVGDFPERDPFEDEDDDEI 304          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: M7YGK0_TRIUA (CAP-Gly domain-containing protein n=2 Tax=Triticeae TaxID=147389 RepID=M7YGK0_TRIUA)

HSP 1 Score: 113 bits (283), Expect = 7.280e-30
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPER-PFDEEDEDEI 87
            +KVG RCEV+PGA+RG V+F+G+AE L  G+WVGV++DEP+G+ DG VKG  FFEC +G G  VR   V VGDFPER PFDEE EDEI
Sbjct:  103 IKVGDRCEVEPGAKRGTVKFVGKAEALGCGFWVGVQYDEPLGKHDGMVKGVRFFECPQGHGVIVRPEKVKVGDFPERDPFDEE-EDEI 189          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A8K1FRW2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRW2_PYTOL)

HSP 1 Score: 114 bits (286), Expect = 1.770e-29
Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFP-ERPFDEEDED 85
            M+VG RCEVQPG RRG V+F+GE   + AGYWVGV FDEPVG+G GTVKG+ +F C   +GGF+R  NVAVG+FP E PF + D++
Sbjct:  183 MRVGDRCEVQPGGRRGQVQFIGEVPEIAAGYWVGVLFDEPVGKGTGTVKGKVYFPCEPKYGGFIRPHNVAVGEFPPEDPFADSDDE 268          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A7S2D093_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D093_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.030e-29
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAG-YWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPERPFDEEDEDE 86
            M+VG RCE QPGARRG + ++GE  GL  G +W+GVRFDEPVGR +G VKG   FEC + +GGF+RG+NV VGDFPE   D ED DE
Sbjct:  204 MEVGMRCECQPGARRGEIAYVGEVAGLSGGGHWLGVRFDEPVGRSNGVVKGETIFECMERYGGFLRGKNVTVGDFPEAELDLEDTDE 290          
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Match: A0A6A3ZRF9_9STRA (CAP-Gly domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZRF9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.830e-29
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKGRCFFECGKGFGGFVRGRNVAVGDFPER-PF---DEEDEDEI 87
            MKVG RCEVQPG RRG V++LGE   +  GYWVGV+FDEPVG+G+G+VKG  +F+C   FGGFVR  NVAVGDFP   PF    ++D+DE+
Sbjct:  183 MKVGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKGNGSVKGTTYFKCELKFGGFVRPHNVAVGDFPALDPFADLSDDDDDEL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13363.2389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGJ0_9PHAE2.830e-4279.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2W9K5_9STRA1.150e-3569.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UBU7_9STRA3.550e-3262.50Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2HN54_9STRA6.150e-3263.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
I1J3U6_BRADI5.690e-3064.71CAP-Gly domain-containing protein n=1 Tax=Brachypo... [more]
UPI00165230036.580e-3062.50uncharacterized protein LOC100193227 isoform X1 n=... [more]
M7YGK0_TRIUA7.280e-3064.77CAP-Gly domain-containing protein n=2 Tax=Triticea... [more]
A0A8K1FRW2_PYTOL1.770e-2961.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2D093_9STRA3.030e-2962.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6A3ZRF9_9STRA3.830e-2961.54CAP-Gly domain-containing protein n=2 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 3..70
e-value: 4.1E-16
score: 69.5
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 3..68
e-value: 1.1E-16
score: 60.6
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 23..65
score: 13.767
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 1..82
e-value: 5.7E-24
score: 85.3
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 2..82
NoneNo IPR availablePANTHERPTHR18916:SF6DYNACTIN SUBUNIT 1-RELATEDcoord: 1..78
NoneNo IPR availablePANTHERPTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGcoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13363contigH-elongata_contig13363:6974..7846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13363.2389.1mRNA_H-elongata_contig13363.2389.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13363 6974..7870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13363.2389.1 ID=prot_H-elongata_contig13363.2389.1|Name=mRNA_H-elongata_contig13363.2389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MKVGQRCEVQPGARRGVVEFLGEAEGLKAGYWVGVRFDEPVGRGDGTVKG
RCFFECGKGFGGFVRGRNVAVGDFPERPFDEEDEDEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
IPR036859CAP-Gly_dom_sf