prot_H-elongata_contig133562.2384.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133562.2384.1
Unique Nameprot_H-elongata_contig133562.2384.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.670e-9
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M+ AKSKHLS+ +F+  ++YSSVS+ IFQTFVC+ +D  V YLRAD
Sbjct:  829 MQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRAD 874          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 4.350e-8
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    4 AKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            AK KHLS+ +F++ ++YSSVS+ IFQTFVC+ +D  V YLRAD
Sbjct:  156 AKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRAD 198          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 7.950e-8
Identity = 26/46 (56.52%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M+ AKSKHLS+ +F++ ++YSSV + IFQTFVC+ +D+ + YLRAD
Sbjct:  118 MQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRAD 163          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.120e-7
Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    2 KVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            +  K+KHLS  +F++  +YSSVS+ +FQTFVCD +D  V+YLRAD
Sbjct:  802 RAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRAD 846          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.850e-7
Identity = 24/46 (52.17%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M V K +HLS+ +F++ ++Y++VSY IF+TFVCD +D  ++YLRAD
Sbjct:    9 MGVVKHRHLSVALFVMFVIYATVSYTIFETFVCDPLDDGISYLRAD 54          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.890e-7
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M+ A  KHLS+ +F++  +YSSVS+ IFQTF+C+ +D +V YLRAD
Sbjct:  133 MREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRAD 178          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5JUB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB2_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.900e-7
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    4 AKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            AK KHLS+ +F++ ++YS VS+ IFQTFVC+ +D  V YLRAD
Sbjct:  479 AKHKHLSIALFIMFVVYSWVSFNIFQTFVCETLDDGVEYLRAD 521          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 9.960e-7
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M+ A  KHLS+ +F++   YSSVS+ IFQTF+C+ +D +V YLRAD
Sbjct:  111 MREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRAD 156          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.500e-6
Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M V K +HLS+ +F++ ++Y++VSY IF+TFVCD +D   +YLR+D
Sbjct:  803 MGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSD 848          
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Match: A0A6H5L4E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E3_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 2.980e-5
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD 46
            M+ AKSKHL +   ++ ++YSS S+ IFQTFVC+ +D+ V YL AD
Sbjct:    1 MQAAKSKHLPITAVIMFVVYSSGSFNIFQTFVCERLDTGVDYLGAD 46          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133562.2384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE6.670e-960.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF7_ECTSI4.350e-860.47Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7G8S0_ECTSI7.950e-856.52Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5JSF5_9PHAE1.120e-755.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0E1_9PHAE2.850e-752.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHA3_9PHAE3.890e-754.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUB2_9PHAE3.900e-758.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUB5_ECTSI9.960e-754.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTU5_ECTSI3.500e-650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4E3_9PHAE2.980e-552.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133562contigH-elongata_contig133562:119..259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133562.2384.1mRNA_H-elongata_contig133562.2384.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133562 94..343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133562.2384.1 ID=prot_H-elongata_contig133562.2384.1|Name=mRNA_H-elongata_contig133562.2384.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
MKVAKSKHLSLGVFLLVILYSSVSYKIFQTFVCDFMDSKVAYLRAD*
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