prot_H-elongata_contig133469.2376.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133469.2376.1
Unique Nameprot_H-elongata_contig133469.2376.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
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BLAST of mRNA_H-elongata_contig133469.2376.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.910e-33
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0 
Query:    1 EQALHSLSLDRYHVFIQNQECVRHVQAQGQAMEGHLSALLTDVHGLGSEFSVFQREAAELIGGHKRNRQTLNHLMQL 77
            ++ALH+LSLD Y VFIQNQECVRHV+AQG+ MEGHL++LLT+VHGLG+EFSVFQREAAEL+GGHKRNRQTL H MQL
Sbjct:   57 DEALHTLSLDHYRVFIQNQECVRHVRAQGKEMEGHLASLLTEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQL 133
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BLAST of mRNA_H-elongata_contig133469.2376.1 vs. uniprot
Match: A0A836CL87_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL87_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.860e-19
Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:    1 EQALHSLSLDRYHVFIQNQECVRHVQAQGQAMEGHLSALLTDVHGLGSEFSVFQREAAELIGGHKRNRQTLNHLMQL 77
            ++ALH LSLD+Y VFI NQ+CVRH++ +G  M  H+ AL   + GL   F+ FQ+EAAEL+ GH+RN+QTL H MQL
Sbjct:   27 DEALHDLSLDQYRVFIVNQDCVRHMKLKGADMAQHIRALEEGLEGLAGGFTTFQKEAAELLAGHRRNKQTLAHHMQL 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133469.2376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7C0_ECTSI1.910e-3380.52Conserved oligomeric Golgi complex subunit 8 n=2 T... [more]
A0A836CL87_9STRA3.860e-1955.84Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133469contigH-elongata_contig133469:15..257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133469.2376.1mRNA_H-elongata_contig133469.2376.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133469 15..257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133469.2376.1 ID=prot_H-elongata_contig133469.2376.1|Name=mRNA_H-elongata_contig133469.2376.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
EQALHSLSLDRYHVFIQNQECVRHVQAQGQAMEGHLSALLTDVHGLGSEF
SVFQREAAELIGGHKRNRQTLNHLMQLQDTP
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