prot_H-elongata_contig13331.2367.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13331.2367.1
Unique Nameprot_H-elongata_contig13331.2367.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length186
Homology
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 3.740e-87
Identity = 131/176 (74.43%), Postives = 153/176 (86.93%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFLEVHNRATAQLELALNNSLPE 176
            +NPF+G  F+ +A  AGC G+LPIF+ SVLLEKSGV+FFRKID+DTKL+VVQVFGA+RN P V LW+ VL+ANAGFFEE+LFRGVIQQ L ++IG  PAL ++SVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGN+LVPI+AH +YD+LTFLEVH RATAQLE  L   LP+
Sbjct:  113 VNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQ 288          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 8.370e-55
Identity = 91/176 (51.70%), Postives = 130/176 (73.86%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFLEVHNRATAQLELALNNSLPE 176
            INP +G A +     +  A ++PIF+ SV+LE+S ++ F++IDRDT+LFVVQ+FGA+R+L  +L  AA+++A+AG  EE+LFRG+IQ  L + IG  PAL + S+LFGLAH+PVPGASS  EA YG  FG LY+ +GGN+  PI++H +YDL TF+EVH RAT+++ +A     P+
Sbjct:   52 INPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQ 227          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: A0A0G4EAR4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAR4_VITBC)

HSP 1 Score: 152 bits (385), Expect = 1.550e-41
Identity = 85/188 (45.21%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRG-VIQQWLVSIIGIWPA-LGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFLEVHNRATAQLELALNNSLPED-RKVHSQCR 185
            ++PF G      A + G   SLP+     LL+    + F+KIDRDTK  V+ +FG E NLP V L AA L+  AGF EE LFRG ++  + + + G +P+ L ++S LFG+AHSPVPGA +F EA YG  FG++Y M+ GNI VP++AH  YD +TFL VH RAT++++    +  PE  R++  Q R
Sbjct:  117 LDPFFGSHLDQEAVVQGVLWSLPLVAFGFLLDNLPWKIFKKIDRDTKFLVLALFGKEANLPTVALLAATLAGAAGFAEEALFRGTLLPLFNLPLFGGFPSGLLISSFLFGVAHSPVPGADAFLEAVYGLWFGVIYYMADGNIWVPMIAHAFYDFVTFLWVHVRATSRVKQLTESVSPEALREMEMQVR 304          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: A0A0G4I0J1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0J1_9ALVE)

HSP 1 Score: 110 bits (275), Expect = 1.570e-25
Identity = 59/152 (38.82%), Postives = 88/152 (57.89%), Query Frame = 0
Query:   16 AGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFLEVHNRATAQLE 167
            AG AG   +      L    +++ R+I+RDT LF + + G +     V L++  L+  A   EE+ FRGV+       +G   +L ++S++FG+ H+  PG S+  EA  GA FG L++ SGGN+LVPIV H VYD +TF+  H R  A+LE
Sbjct:  110 AGMAGGFAV------LNLLPLDYIREIERDTDLFCLGLMGKDTKPGRVFLYSLALALGASVSEEIFFRGVLLPLGAQYLGEGVSLVVSSLIFGVGHTNTPGGSTLLEAGLGAVFGYLFISSGGNLLVPIVCHFVYDFITFVVSHTRGKARLE 255          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: UPI001260D703 (CPBP family intramembrane metalloprotease n=1 Tax=Tautonia marina TaxID=2653855 RepID=UPI001260D703)

HSP 1 Score: 92.0 bits (227), Expect = 8.610e-20
Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFL 156
            I+P++ L    S  L G A +LP+ +  ++ ++     FR + R   L    +    R  P   L  A+++  AG  EE LFRGV+Q+ L   +G WPAL + S++FGL H+  P   +      GA  GLL++M+G N+LVPIVAH VYDL+  +
Sbjct:   38 IDPWNALEGNISGVLIGIAATLPMILLLLICDRDA---FRPMKRIRGLLEQFLLPPLRGRPWWEL--ALIAGAAGLGEETLFRGVMQEVLRDWLGFWPALAIASIVFGLLHALTP-TYAIVATLIGAYLGLLFVMTG-NLLVPIVAHGVYDLIALI 186          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: L1IJ81_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ81_GUITC)

HSP 1 Score: 90.5 bits (223), Expect = 5.470e-19
Identity = 56/137 (40.88%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   17 GCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAH--SPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYD 151
            G A SLP+   S LL+   +E  ++I   T+ F  ++F    +   +L         AGF EELLFRGV+QQ L    G+ PA+ LTSV FG AH  +P     SF  + +   FG++ + S GN+LVPI+AH VYD
Sbjct:   91 GFAWSLPLLAMSSLLQTLDLEPIKEIQALTEAFARKLFSGRPDYQLILFCIC-----AGFGEELLFRGVLQQKLAESAGLIPAISLTSVAFGAAHFLTPTYFLLSFIGSIF---FGVVLIQSNGNLLVPIIAHAVYD 219          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: A0A831RF71_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831RF71_9GAMM)

HSP 1 Score: 88.6 bits (218), Expect = 1.340e-18
Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLW--AAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGG-NILVPIVAHTVYDLLTFLEV 158
            ++P S + + P A   G  G+LP+ +   L+ +  V    +I R     +++  G    L A   W   A ++  AGF EE+LFRGV+Q W+ S+ G WPAL ++++LFGLAHS  P   +      G   G L  + G  N+L+P++ H+VYDL  FL V
Sbjct:   34 LDPLSLIHWRPQALSLGLLGTLPLLLFFGLVYRLEVTQLEQIKR----LLIETLGP---LLAACRWYELAYVAFLAGFCEEILFRGVLQPWMESLWGWWPALIVSNLLFGLAHSVTP-LYAVLAMLTGMYLGWLLDVGGERNLLIPMMVHSVYDLAAFLVV 186          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: UPI00147533BC (CPBP family intramembrane metalloprotease n=1 Tax=Tautonia rosea TaxID=2728037 RepID=UPI00147533BC)

HSP 1 Score: 88.6 bits (218), Expect = 1.500e-18
Identity = 52/157 (33.12%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWA-AVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVYDLLTFL 156
            I+P+  L      ++ G   ++P+F+  V+ ++       +I R  + F++        L     W  A+++A AG  EE LFRG++Q+ L+  +G+WPAL + S++FGL H+  P   +      GA  G+L +M+G N+LVPIVAH +YDL+  +
Sbjct:   28 IDPWRTLEPNLKGWVIGIGSAVPMFVLLVVCDRDDFPAMIRIRRLLEQFLLP------PLRGCRWWELALIAAAAGLGEETLFRGLLQEALLGWLGVWPALAIASIIFGLLHALTP-TYAILATVIGAYLGMLSLMTG-NLLVPIVAHGLYDLIALI 176          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: UPI0003B67F7A (CPBP family intramembrane metalloprotease n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B67F7A)

HSP 1 Score: 84.3 bits (207), Expect = 5.250e-17
Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPI---FIASVLLEKSGVEFFRKIDRDTKLFVVQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGG-NILVPIVAHTVYDLLTFLEV 158
            I+P +  A+   A   G  G+ P+   F  S  L  SG+E  +++  DT   +  +  A R    V +     +A AG  EE+LFRGV+Q WL S+ G  PAL ++++LFGLAHS  P   +   A  G   G L  + G  N+LVPIV H+VYDL  F+ V
Sbjct:   30 IDPMASFAWRSEALSLGLLGTFPLLAFFGISYRLPVSGLEKIKRLLIDT---LGSLLAASRWYELVYV-----AALAGVGEEVLFRGVLQPWLESLWGWGPALLISNLLFGLAHSVTP-LYTVLAALTGMYLGWLLDVGGERNLLVPIVVHSVYDLAAFIIV 182          
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Match: A0A2N1XRD7_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XRD7_9GAMM)

HSP 1 Score: 84.3 bits (207), Expect = 5.960e-17
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 0
Query:    1 INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKI-DRDTKLFVVQVFGAERNLPAVLLWAAV--LSANAGFFEELLFRGVIQQWLVSIIGIWPALGLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGG-NILVPIVAHTVYDLLTFLEV 158
            INPF+ ++F+  A L G  G+LP+F+  +LLE+      +KI D   +     ++G          W  +  LSA AGF EELLFRG++Q W+ S  G+   L  ++++FGL H+  P  +    A  G   GL     G  N+L P+V H +YD + FL +
Sbjct:   35 INPFAEISFSERALLYGILGTLPLFLLFLLLEQIHTPPLQKIRDLLAETLGTGLYGCH--------WTDLFLLSAIAGFSEELLFRGLLQPWMESAWGMAAGLLGSNLIFGLVHAVTPWYA-LLAALVGVYLGLALDYGGERNLLTPMVIHGLYDFVVFLVI 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13331.2367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE3_ECTSI3.740e-8774.43Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
A0A836CHD9_9STRA8.370e-5551.70CAAX protease self-immunity-domain-containing prot... [more]
A0A0G4EAR4_VITBC1.550e-4145.21Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4I0J1_9ALVE1.570e-2538.82Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
UPI001260D7038.610e-2037.18CPBP family intramembrane metalloprotease n=1 Tax=... [more]
L1IJ81_GUITC5.470e-1940.88Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A831RF71_9GAMM1.340e-1836.02CPBP family intramembrane metalloprotease n=1 Tax=... [more]
UPI00147533BC1.500e-1833.12CPBP family intramembrane metalloprotease n=1 Tax=... [more]
UPI0003B67F7A5.250e-1738.27CPBP family intramembrane metalloprotease n=1 Tax=... [more]
A0A2N1XRD7_9GAMM5.960e-1735.19CPBP family intramembrane metalloprotease n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003675CAAX prenyl protease 2PFAMPF02517CPBPcoord: 64..152
e-value: 1.1E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR40041FAMILY NOT NAMEDcoord: 58..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..88
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13331contigH-elongata_contig13331:4851..6635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13331.2367.1mRNA_H-elongata_contig13331.2367.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13331 2803..6635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13331.2367.1 ID=prot_H-elongata_contig13331.2367.1|Name=mRNA_H-elongata_contig13331.2367.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp
INPFSGLAFTPSAFLAGCAGSLPIFIASVLLEKSGVEFFRKIDRDTKLFV
VQVFGAERNLPAVLLWAAVLSANAGFFEELLFRGVIQQWLVSIIGIWPAL
GLTSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNILVPIVAHTVY
DLLTFLEVHNRATAQLELALNNSLPEDRKVHSQCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003675CAAX_protease_2