prot_H-elongata_contig133173.2359.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133173.2359.1
Unique Nameprot_H-elongata_contig133173.2359.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig133173.2359.1 vs. uniprot
Match: A0A6H5L969_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L969_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.780e-43
Identity = 84/184 (45.65%), Postives = 116/184 (63.04%), Query Frame = 0
Query:    1 RVLVVPDKISRGGKDGDARLRYVLATVHEAFDPDFVFFCNEHTFVIADNLRCFVQGFNPAEAVYVQNQFRENDGLPWIDPETDKVMLNSGAGGVVLSLGSLEVLQRAWKLIEPSS-PDGAKKAIRSSSTLSKTADEAR---LACLARSDFERDNPGVTLARCLEHFGVKAQDSVDDEVGVRFRS 180
            RVLVVPD ++RGG DGD RLRYVLA + E +DP F+F+CNEHT+VIA+NL C+ +  +P++ VY+ N+FR        + +  K +LNSGA G +LS GSL +L +AW+  E     D    ++  S   S    E R     C+A+S++ER NPG+TLARCL H  V A D+   + G RF +
Sbjct:  175 RVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLLCYTRSLDPSDPVYLGNRFRRES-----ERDQGKALLNSGAAGFILSRGSLSLLHQAWRDGEGGGRADSLGGSVDHSGGHSDGKGEERGPPTECVAKSNYERGNPGITLARCLAHLRVYAMDTTGSQGGQRFNA 353          
BLAST of mRNA_H-elongata_contig133173.2359.1 vs. uniprot
Match: D7FS30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS30_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.490e-36
Identity = 72/164 (43.90%), Postives = 104/164 (63.41%), Query Frame = 0
Query:   21 RYVLATVHEAFDPDFVFFCNEHTFVIADNLRCFVQGFNPAEAVYVQNQFRENDGLPWIDPETDKVMLNSGAGGVVLSLGSLEVLQRAWKLIEPSS-PDGAKKAIRSSSTLSKTADEAR---LACLARSDFERDNPGVTLARCLEHFGVKAQDSVDDEVGVRFRS 180
            RYVLA ++E +DPDF+F+CNEHT+VIA+NL+C+ +  +P++ VY+ N+FR        +    K +LNSGA G VLS GSL +L +AW+  E     D    ++  S   S    E R     C+A+S++ER NPG+TLARCL H GV A+D+  ++ G RF +
Sbjct:   35 RYVLARIYEIYDPDFLFYCNEHTYVIAENLQCYTRSLDPSDPVYLGNRFRREG-----EKNQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEGEERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGNQGGQRFNA 193          
BLAST of mRNA_H-elongata_contig133173.2359.1 vs. uniprot
Match: A0A7S4J8K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8K6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.480e-10
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 0
Query:    1 RVLVVPDKISRGGKDGDARLRYVLATVHEAFDPDFVFFCNEHTFVIADNLRCFVQGFNPAEAVYVQNQFRENDGLPWIDPETDKVMLNSGAGGVVLSLGSLEVLQRAWKLIEP 113
            ++LV+P+ I    + G  RL++ + T+H+A +PDF FF N+HTFV+ ++L  F+ G +P   +Y  +  +          E +    NSGA G VLS  ++  L + W   +P
Sbjct:  226 QLLVLPESIKE--ESGVLRLQHTVRTIHDAINPDFAFFVNDHTFVMPEHLCLFLSGRDPTRELYAGHAMKN---------EKEGYAFNSGAAGYVLSKRTMGDLVKKWDEKDP 327          
BLAST of mRNA_H-elongata_contig133173.2359.1 vs. uniprot
Match: K0TD75_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TD75_THAOC)

HSP 1 Score: 53.5 bits (127), Expect = 3.540e-5
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    1 RVLVVPDKISRGGKDGDARLRYVLATVHEAFDPDFVFFCNEHTFVIADNLRCFVQGFNPAEAVYVQNQFRENDGLPWIDPETDKVMLNSGAGGVVLS 97
            +VL +P  I      G  RL Y + TV E  +P F+FF N+HTFV+ ++L  F+Q  + ++  YV +  +   G P        V  NSGA G VLS
Sbjct:  143 QVLKLPSDIKVD--QGVERLLYSIRTVSETVNPSFIFFTNDHTFVLPNHLCRFLQKRDASKDAYVGHALK-GKGTP--------VAFNSGAAGYVLS 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133173.2359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L969_9PHAE1.780e-4345.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS30_ECTSI2.490e-3643.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4J8K6_9STRA1.480e-1032.74Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0TD75_THAOC3.540e-537.11Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133173contigH-elongata_contig133173:195..1320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133173.2359.1mRNA_H-elongata_contig133173.2359.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133173 195..1320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133173.2359.1 ID=prot_H-elongata_contig133173.2359.1|Name=mRNA_H-elongata_contig133173.2359.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
RVLVVPDKISRGGKDGDARLRYVLATVHEAFDPDFVFFCNEHTFVIADNL
RCFVQGFNPAEAVYVQNQFRENDGLPWIDPETDKVMLNSGAGGVVLSLGS
LEVLQRAWKLIEPSSPDGAKKAIRSSSTLSKTADEARLACLARSDFERDN
PGVTLARCLEHFGVKAQDSVDDEVGVRFRS
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