prot_H-elongata_contig133082.2356.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133082.2356.1
Unique Nameprot_H-elongata_contig133082.2356.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.410e-22
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0
Query:   44 QINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEAEL 92
            QINVGKLDP SG FTG+SDVYALAGYLRGRGEADEALTCLV KKDE+EL
Sbjct:   33 QINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A8J2SUB2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUB2_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 9.200e-10
Identity = 28/48 (58.33%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEA 90
            +QINVG +DP +G+ TG S+ YAL+GY+R +GE+D ALT LV+K+DE+
Sbjct:  140 VQINVGTIDPNTGLHTGGSETYALSGYVRNKGESDMALTELVRKQDES 187          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A1Z5KP36_FISSO (40S ribosomal protein S21 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP36_FISSO)

HSP 1 Score: 58.9 bits (141), Expect = 1.730e-9
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEA 90
            +QINV  +DP +GI TG S+VY LAGY+R + E D ALT LV+ KD A
Sbjct:   32 VQINVANVDPVTGIMTGDSNVYCLAGYIRFKSEGDMALTSLVRAKDAA 79          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 6.940e-9
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEAEL 92
            +QINV  +DP +G+FTG+S  YA+AGY+R + E D A T LV+  D+  L
Sbjct:   32 VQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKKVL 81          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A7S0FIC7_9STRA (40S ribosomal protein S21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIC7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.420e-8
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKD 88
            +QINVG +DP +G+FTG+S  +A++GY+R + EAD ALT L +  D
Sbjct:   32 VQINVGNVDPVTGLFTGESTPFAISGYVRAKSEADMALTALAKAND 77          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 56.2 bits (134), Expect = 1.750e-8
Identity = 26/46 (56.52%), Postives = 38/46 (82.61%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKD 88
            +QINVG+++ A+G+FTG+SD YALAGY+R  GE D+A+T L ++ D
Sbjct:   32 VQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 54.3 bits (129), Expect = 9.940e-8
Identity = 26/46 (56.52%), Postives = 38/46 (82.61%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKD 88
            +QINV +++ A+G+FTG+SD +ALAGY+R +GEAD ALT L ++ D
Sbjct:   32 VQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A2R5GQF8_9STRA (40S ribosomal protein S21 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQF8_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.510e-7
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEAE 91
            +QINVG +DP +G++TG+    AL+GY+R +GE D ALT L  K  E E
Sbjct:   32 IQINVGHVDPDTGLYTGKFTPIALSGYIRSKGEGDMALTALASKIQEEE 80          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A067BLB8_SAPPC (40S ribosomal protein S21 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLB8_SAPPC)

HSP 1 Score: 53.1 bits (126), Expect = 2.820e-7
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDE 89
            +QI V ++D A+G++TG +DVYALAGY+R +GE D ALT L ++ +E
Sbjct:   32 VQIAVAQVD-ANGVYTGHNDVYALAGYIRNKGEGDHALTELARRAEE 77          
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Match: A0A0P1AAL2_PLAHL (40S ribosomal protein S21 n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AAL2_PLAHL)

HSP 1 Score: 52.0 bits (123), Expect = 7.990e-7
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   43 LQINVGKLDPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKD 88
            +QINVG+++ A+G+FTG+SD +ALAGY+R  GE D A+T L ++ D
Sbjct:   32 VQINVGRVN-ANGVFTGESDTFALAGYIRHHGEGDIAITELSRQAD 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133082.2356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FW88_ECTSI1.410e-2289.8040S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
A0A8J2SUB2_9STRA9.200e-1058.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5KP36_FISSO1.730e-958.3340S ribosomal protein S21 n=1 Tax=Fistulifera sola... [more]
B8BZU9_THAPS6.940e-950.0040S ribosomal protein S21 n=1 Tax=Thalassiosira ps... [more]
A0A7S0FIC7_9STRA1.420e-852.1740S ribosomal protein S21 n=1 Tax=Minutocellus pol... [more]
G4ZUD9_PHYSP1.750e-856.5240S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
K3WSU9_GLOUD9.940e-856.5240S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]
A0A2R5GQF8_9STRA1.510e-751.0240S ribosomal protein S21 n=1 Tax=Hondaea fermenta... [more]
A0A067BLB8_SAPPC2.820e-753.1940S ribosomal protein S21 n=5 Tax=Saprolegniaceae ... [more]
A0A0P1AAL2_PLAHL7.990e-754.3540S ribosomal protein S21 n=16 Tax=Peronosporaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 43..88
e-value: 4.5E-11
score: 42.7
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 40..91
e-value: 2.9E-10
score: 41.9
NoneNo IPR availablePRODOMPD006584coord: 43..91
e-value: 3.0E-6
score: 116.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133082contigH-elongata_contig133082:575..1226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133082.2356.1mRNA_H-elongata_contig133082.2356.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133082 89..1809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133082.2356.1 ID=prot_H-elongata_contig133082.2356.1|Name=mRNA_H-elongata_contig133082.2356.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MACFCSSLRTPLLSRRPPFSRRVSLTPVQFKGNPVRPPLSLDLQINVGKL
DPASGIFTGQSDVYALAGYLRGRGEADEALTCLVQKKDEAEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001931Ribosomal_S21e
IPR038579Ribosomal_S21e_sf