prot_H-elongata_contig132717.2338.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132717.2338.1
Unique Nameprot_H-elongata_contig132717.2338.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig132717.2338.1 vs. uniprot
Match: D7FP88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP88_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 5.090e-38
Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0
Query:    1 QLEELEDRDVAATSVILKKDGTIEAGATDGPLPLACRGKWSFRDKAFTMEISREFDASIPYTVSRILTGFVEEVLPATDTVILSGDITMENMEV 94
            QLEELEDRDVA TSV+L +DG++ AG T+GP+P+  RGKWSF   AF M++ REFDASIPY VSR++TG+VEEVL ATDTVI++GDI ME MEV
Sbjct:   98 QLEELEDRDVAETSVVLNEDGSVTAGKTNGPIPIQVRGKWSFDGTAFRMDLHREFDASIPYMVSRVMTGYVEEVLSATDTVIITGDIVMEEMEV 191          
BLAST of mRNA_H-elongata_contig132717.2338.1 vs. uniprot
Match: H6WBB0_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB0_VAULI)

HSP 1 Score: 102 bits (255), Expect = 4.350e-26
Identity = 47/93 (50.54%), Postives = 68/93 (73.12%), Query Frame = 0
Query:    2 LEELEDRDVAATSVILKKDGTIEAGATDGPLPLACRGKWSFRDKAFTMEISREFDASIPYTVSRILTGFVEEVLPATDTVILSGDITMENMEV 94
            LEELED+D   TS++L +DG++  GAT GP+P++ RG+WS  +K F MEI+REF++  P+ V+R  +G +EE+L  T T+ILSGDI M+   V
Sbjct:   20 LEELEDKDSCETSIVLNEDGSVSLGATSGPIPMSARGEWSMEEKNFEMEITREFESIEPFEVTRKFSGEIEEILKETKTIILSGDILMDETPV 112          
BLAST of mRNA_H-elongata_contig132717.2338.1 vs. uniprot
Match: A0A835Z9V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.330e-24
Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 QLEELEDRDVAATSVILKKDGTIEAGATDGPLPLACRGKWSFRDK-AFTMEISREFDASIPYTVSRILTGFVEEVLPATDTVILSGDITME 90
            QLEELED++ AATSV+L  DG++  GATDGPLP +  G WS  D+ AF M + REF++S  Y V+R  TG +EEV+ AT T+IL+G+I M+
Sbjct:   70 QLEELEDKETAATSVVLNGDGSVSFGATDGPLPKSTTGSWSMDDEGAFRMTVVREFESSYSYEVTRTFTGVIEEVMEATKTIILAGEIYMD 160          
BLAST of mRNA_H-elongata_contig132717.2338.1 vs. uniprot
Match: A0A6U0KI98_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KI98_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.690e-11
Identity = 35/74 (47.30%), Postives = 41/74 (55.41%), Query Frame = 0
Query:    1 QLEELEDRDVAATSVILKKDGTIEAGATDGPLPLACRGKWSFRDKAFTMEISREFDASIPYTVSRILTGFVEEV 74
            QLEELEDRD  +T V+LK DGT+  GATDGP P    G W F    F ME+ R +    P   S  +  F  EV
Sbjct:   50 QLEELEDRDDCSTEVLLKDDGTVTTGATDGPPPSESSGTWEFAGDTFKMELKRVYQGGEPPLKSTDVGEFKYEV 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132717.2338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FP88_ECTSI5.090e-3869.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H6WBB0_VAULI4.350e-2650.54Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A835Z9V2_9STRA1.330e-2454.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0KI98_9STRA3.690e-1147.30Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132717contigH-elongata_contig132717:57..1446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132717.2338.1mRNA_H-elongata_contig132717.2338.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132717 57..1446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132717.2338.1 ID=prot_H-elongata_contig132717.2338.1|Name=mRNA_H-elongata_contig132717.2338.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
QLEELEDRDVAATSVILKKDGTIEAGATDGPLPLACRGKWSFRDKAFTME
ISREFDASIPYTVSRILTGFVEEVLPATDTVILSGDITMENMEV
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