prot_H-elongata_contig132444.2321.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132444.2321.1
Unique Nameprot_H-elongata_contig132444.2321.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: D7FPY6_ECTSI (V-type proton ATPase subunit a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY6_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 2.550e-91
Identity = 157/217 (72.35%), Postives = 175/217 (80.65%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFDGFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQAT--TILLLLAFVSVPFLLLGKPLMIRSRMKKHA-REDSFSSQSQLMGGEHKA---------------HAHEESHDFSEIVIHQV 199
            MKMKTSVI+GV QMTFGV LKAMNA+YFKE LDFF+EFIPMIIFVL+LFGYM+VLIFMKWSI+W+YRM+TATCFDG TP ++ C+  STTA+MCPLDYGG+GDGCQPPNLITSLINIALSPG+VDEPMYA Q +  TILLLLA  S+P LLL KPL IRSRMKK A R DSFSS+SQLM GEH +               H   E HDFSEIVIHQ 
Sbjct:  646 MKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMIVLIFMKWSIDWDYRMYTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGTVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVDNGGHGAAGGDHGGHEEHDFSEIVIHQA 862          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A7S2BXY4_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXY4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 6.890e-68
Identity = 123/223 (55.16%), Postives = 150/223 (67.26%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFDGFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQA--TTILLLLAFVSVPFLLLGKPLMIRSRMK-KHAREDSFSSQSQLM----------------GGEH-------KAHAHEESHDFSEIVIH 197
            MKMK SVIIG+ QMT G+CLK +NA+YF+E LDFFFEFIPM+IF +A FGYMVVLIFMKW I+W+ RM++ATC           + + TTA+MCPLDYGG+GDGCQPPNLIT+L+N+AL PG+VDEP+Y  QA    +LLLLA   VP +LL KPLMIRSRM  +H   +   S++ L+                GG H            EE HDFSEIVIH
Sbjct:    5 MKMKLSVIIGIIQMTVGICLKGLNALYFEEQLDFFFEFIPMLIFDMAFFGYMVVLIFMKWMIDWDARMYSATCNSDHDLYPKCLDGTYTTADMCPLDYGGSGDGCQPPNLITTLMNMALMPGTVDEPLYPGQAGIQVVLLLLAVACVPVILLAKPLMIRSRMNAEHGNANGSFSENPLIDEKDGYGVVVDHGNQGGGGHGEXXXXXXXXXXEEEHDFSEIVIH 227          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A6H5L5K7_9PHAE (V-type proton ATPase subunit a n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K7_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 2.280e-67
Identity = 116/168 (69.05%), Postives = 129/168 (76.79%), Query Frame = 0
Query:   51 YMVVLIFMKWSINWEYRMFTATCFDGFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQAT--TILLLLAFVSVPFLLLGKPLMIRSRMKKHA-REDSFSSQSQLMGGEHKAH----------------AHEESHDFSEIVIHQV 199
            YM++LIFMKWSI+W+YRMFTATCFDG TP ++ C+  STTA+MCPLDYGG+GDGCQPPNLITSLINIALSPG VDEPMYA Q +  TILLLLA  S+P LLL KPL IRSRMKK A R DSFSS+SQLM GEHK+                  HEE HDFSEIVIHQ 
Sbjct:    4 YMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGVVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHKSSDKVENGGHGAAGGDSGGHEE-HDFSEIVIHQA 170          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A835ZAQ4_9STRA (V-type proton ATPase subunit a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ4_9STRA)

HSP 1 Score: 230 bits (586), Expect = 6.600e-67
Identity = 128/226 (56.64%), Postives = 157/226 (69.47%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFD-GFTPLDIVC---------NDSSTT----AEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQA--TTILLLLAFVSVPFLLLGKPLMIRS-RMKKHAREDSFSSQSQLM----------GGEHKAHAHEESHDFSEIVIHQV 199
            MKMK SVI+G+ QMT G+ LKAMNA YFK+ LDF+ EF+PMIIF  ALFGYMV+LIFMKW INW+ RM+ ATC D GFTP    C         N SS +    AEMCPL+YGGTGDGCQPPNLIT+LINIAL+PG+VD+PMY  Q    T LLL+AF  +P LL GKP M++    ++H R+DSF+S S+L+          G  H A  H++SH F E++IHQ 
Sbjct:  595 MKMKMSVILGILQMTMGIILKAMNAKYFKQPLDFYLEFVPMIIFDGALFGYMVLLIFMKWGINWQERMYMATCLDTGFTPQGDACVLGVSTTGENLSSASKYVAAEMCPLNYGGTGDGCQPPNLITTLINIALAPGTVDDPMYKGQGGVQTFLLLVAFFCIPVLLFGKPYMLKKMETQRHTRQDSFASDSELVPGAGAHANNAGDAHAAGGHDDSHSFGEVIIHQA 820          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A7S2FQ72_9STRA (V-type proton ATPase subunit a n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQ72_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.200e-65
Identity = 126/218 (57.80%), Postives = 151/218 (69.27%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCF-DGFTPLDIVCN-DSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQAT--TILLLLAFVSVPFLLLGKPLMIRSRMKKHAREDSFSSQSQLMGGE-----HKAHAHE----------ESHDFSEIVIHQV 199
            MKMK+SVIIGV QM  G+CL+ MNAVYF E LDF+FEF+PM +F   LFGYM+V+IF+KWSI+W++RM+  TC  D     D   N D    A++CPLDYGGTGDGCQPPNLIT+LINIAL+PGSVDEP+YA QAT  T++LL AF SVP LLLGKP  I  +MK+  + +S S  +   GGE     HK    E          E HDFSEIVIHQ 
Sbjct:   77 MKMKSSVIIGVMQMCVGICLRGMNAVYFGEWLDFYFEFLPMCVFAFGLFGYMIVVIFVKWSIDWQHRMYQGTCNEDNAHWPDCFDNPDDYELADLCPLDYGGTGDGCQPPNLITTLINIALAPGSVDEPLYAGQATVQTVILLAAFGSVPVLLLGKPYFISRQMKQ--KHESDSRVALTSGGEFGDEYHKGLEEEGGHGEGGDDHEEHDFSEIVIHQA 292          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A7S2G7U3_9STRA (V-type proton ATPase subunit a n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7U3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 5.170e-62
Identity = 114/202 (56.44%), Postives = 147/202 (72.77%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFDGFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQA--TTILLLLAFVSVPFLLLGKPLMIRSRMKKHAREDSFSSQSQLMGGEH-KAHAHEESHDFSEIVIHQV 199
            MKMK SVI+G+ QMT G+ LK +NA++F E LDFFFEFIPM+IF +A FGYMV+LIFMKW+INW+ RM++ATC +  +      + + TTA++CPLDYGG+GDGCQPPNLIT+L+N+AL PG+VDEP+Y  QA     LLL+A   VP +L+ KPL +R+         SFS Q  +   +H KA  HEE HDF+EIVIHQ 
Sbjct:  573 MKMKISVILGITQMTLGIILKGINALFFSESLDFFFEFIPMLIFDIAFFGYMVLLIFMKWTINWDERMYSATCTEDHSLYPDCLDGTYTTADLCPLDYGGSGDGCQPPNLITTLMNMALQPGTVDEPLYEGQAGIQVALLLIAVACVPVILVAKPLFLRNAHSDQGGPGSFSEQQLIDEDKHDKAGGHEE-HDFTEIVIHQA 773          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A7S3DTC9_9STRA (V-type proton ATPase subunit a n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DTC9_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.670e-60
Identity = 111/223 (49.78%), Postives = 136/223 (60.99%), Query Frame = 0
Query:    2 KMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFD-----------------------GFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQAT--TILLLLAFVSVPFLLLGKPLMIRSRMKKHAREDSFSSQSQLMGGEHKAHAHEESHDFSEIVIHQV 199
            KMK SV+ G+ QM  G CLK +NA+YFKE LDF +EFIPM++F  ++F YMV LIF KW+INW  RM +ATC +                       G TP  +VC+ S  TA+ CPLD+GG GDGCQPPNLIT+LINIAL+PG VDEPMY  Q     ILLL AFVSVP LLL KP  +  +     +  S  ++     G+     H+E H F EIVIHQ 
Sbjct:   31 KMKLSVVFGIIQMFSGTCLKGLNAIYFKEPLDFLYEFIPMVVFAASMFIYMVFLIFYKWAINWHSRMLSATCVNPYSDTWGSSAYDGEWVQCNDNGYGCTPWGLVCDGSENTADKCPLDFGGDGDGCQPPNLITTLINIALNPGVVDEPMYGGQGQIQNILLLCAFVSVPVLLLAKPYFLSKQQHAPIQHHSDDAEDGQAAGDD----HDEEHGFGEIVIHQA 249          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A6V1TGH2_HETAK (V-type proton ATPase subunit a n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGH2_HETAK)

HSP 1 Score: 200 bits (508), Expect = 1.960e-56
Identity = 110/204 (53.92%), Postives = 140/204 (68.63%), Query Frame = 0
Query:    1 MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFDGFT---PLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQATT--ILLLLAFVSVPFLLLGKPLMIRSRMKKHA----REDSFSSQSQLMGGE-HKAHAHEESHDFSEI 194
            MKMKTSVIIG+  MTFG+CL+ +N +YFK+ + F+ EF+PM+IF L++FGYMV+LIF+KWSINWE RM   TC D  T        C+     A +C LDYGGTGDGCQPPNLIT+LI I LSPGSV+EPM+A QA+   I+LL+ F++VP LLLG+PL  +   K H     R DSF+S S L   E +K H   + H  S +
Sbjct:  550 MKMKTSVIIGIIHMTFGICLRGLNCIYFKDKIGFWLEFVPMLIFDLSMFGYMVLLIFIKWSINWEDRMLMGTCNDDGTNAYDASYSCDPDGDVASVCFLDYGGTGDGCQPPNLITTLIGIVLSPGSVEEPMFAGQASVQVIVLLIIFITVPVLLLGRPLAEKFAAKSHGHGAPRADSFASDSPLADPEANKGHGGHDEHGESPV 753          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A1E7EP61_9STRA (V-type proton ATPase subunit a n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP61_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.930e-56
Identity = 117/226 (51.77%), Postives = 137/226 (60.62%), Query Frame = 0
Query:    2 KMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFDGF-----------------------TPLDIVCNDSS-TTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQAT--TILLLLAFVSVPFLLLGKPLMIRSRMKK--HAREDSFSSQSQLMGGEHKAHAHEESHDFSEIVIHQV 199
            KMK SV+ G++QM  G CLK +NA+YF E LD FFE IPM+IF  +LF YMV+LIFMKWSI+W YRM  ATC+D                         TP    C  S  TTA+ CP DYGG+GDGCQPPNLITSLINIALSPG+VDEPMY  QA    ILL  A  SVP LL+ KP  I  ++ +  H+     S+      G+H  H   E HDF EIVIHQ 
Sbjct:  547 KMKLSVVFGISQMFMGTCLKGINAIYFNEKLDLFFEVIPMMIFSSSLFLYMVLLIFMKWSIDWNYRMSLATCYDPTGDEWLSDWTMCDTSTSDDSNGMCTPWGYACTSSGDTTADKCPFDYGGSGDGCQPPNLITSLINIALSPGTVDEPMYKGQAPIQNILLFAAVASVPVLLIAKPYFISQQVHEAPHSVVVIASTDDDEXEGQHGEHEEVEEHDFGEIVIHQA 772          
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Match: A0A7S2IBP9_9STRA (V-type proton ATPase subunit a n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBP9_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.020e-55
Identity = 111/221 (50.23%), Postives = 137/221 (61.99%), Query Frame = 0
Query:    2 KMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFGYMVVLIFMKWSINWEYRMFTATCFD---------------------GFTPLDIVCNDSSTTAEMCPLDYGGTGDGCQPPNLITSLINIALSPGSVDEPMYAQQATT--ILLLLAFVSVPFLLLGKPLMIRSRMKKHAREDSFSSQSQLMGGEHKAHAHEESHDFSEIVIHQV 199
            KMK SVI G+ QM  G CLK +NAVYF + LDFFFEF+PM+ F  +LF YM+VLI+MKWSINW  RM +ATC D                       TP   VC  + +TA+ CPL++GG+GDGCQPPNLIT+LINIAL PG VDEPMY  Q +T  +LL +A +SVP LLL KP  +  +M+     +S   Q +    EH+     E H F EIVIHQ 
Sbjct:  353 KMKLSVIFGIVQMFAGTCLKGINAVYFGQKLDFFFEFLPMVAFAASLFLYMIVLIYMKWSINWNSRMLSATCLDPNGEGWESPDYEGEWKPCEGDACTPWGHVCESNDSTADKCPLNFGGSGDGCQPPNLITTLINIALQPGVVDEPMYDNQGSTQNVLLFIALISVPVLLLAKPYFLSKQMEHDHVVESAVEQEE--DDEHEG----EDHGFGEIVIHQA 567          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132444.2321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY6_ECTSI2.550e-9172.35V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A7S2BXY4_9STRA6.890e-6855.16V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A6H5L5K7_9PHAE2.280e-6769.05V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A835ZAQ4_9STRA6.600e-6756.64V-type proton ATPase subunit a n=1 Tax=Tribonema m... [more]
A0A7S2FQ72_9STRA1.200e-6557.80V-type proton ATPase subunit a n=1 Tax=Florenciell... [more]
A0A7S2G7U3_9STRA5.170e-6256.44V-type proton ATPase subunit a n=1 Tax=Dictyocha s... [more]
A0A7S3DTC9_9STRA7.670e-6049.78V-type proton ATPase subunit a n=1 Tax=Amphiprora ... [more]
A0A6V1TGH2_HETAK1.960e-5653.92V-type proton ATPase subunit a n=3 Tax=Heterosigma... [more]
A0A1E7EP61_9STRA2.930e-5651.77V-type proton ATPase subunit a n=1 Tax=Fragilariop... [more]
A0A7S2IBP9_9STRA1.020e-5550.23V-type proton ATPase subunit a n=1 Tax=Helicotheca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPFAMPF01496V_ATPase_Icoord: 1..190
e-value: 1.7E-45
score: 155.3
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPANTHERPTHR11629VACUOLAR PROTON ATPASEScoord: 1..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..128
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132444contigH-elongata_contig132444:218..1570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132444.2321.1mRNA_H-elongata_contig132444.2321.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132444 191..1570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132444.2321.1 ID=prot_H-elongata_contig132444.2321.1|Name=mRNA_H-elongata_contig132444.2321.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MKMKTSVIIGVAQMTFGVCLKAMNAVYFKEGLDFFFEFIPMIIFVLALFG
YMVVLIFMKWSINWEYRMFTATCFDGFTPLDIVCNDSSTTAEMCPLDYGG
TGDGCQPPNLITSLINIALSPGSVDEPMYAQQATTILLLLAFVSVPFLLL
GKPLMIRSRMKKHAREDSFSSQSQLMGGEHKAHAHEESHDFSEIVIHQVC
TR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002490V-ATPase_116kDa_su