prot_H-elongata_contig13203.2301.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13203.2301.1
Unique Nameprot_H-elongata_contig13203.2301.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.740e-10
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    1 MAGTDGLESLFVVVRTLTHARNVDAKELSERFSSANGVEQV 41
            M GTDGLE+LF +VRTLTHA NVDAKE  ERF +  GVEQV
Sbjct:  114 MIGTDGLENLFAIVRTLTHASNVDAKEAIERFGAVIGVEQV 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2E6_9PHAE7.740e-1073.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13203contigH-elongata_contig13203:2652..2816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13203.2301.1mRNA_H-elongata_contig13203.2301.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13203 2652..2930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13203.2301.1 ID=prot_H-elongata_contig13203.2301.1|Name=mRNA_H-elongata_contig13203.2301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MAGTDGLESLFVVVRTLTHARNVDAKELSERFSSANGVEQVYEKHPQLRR
TSKRL
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