prot_H-elongata_contig131951.2294.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131951.2294.1
Unique Nameprot_H-elongata_contig131951.2294.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A6H5L5V9_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V9_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.310e-31
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 GLDYVVAHLIKCLNTDANRGFSSNPERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            GLDYVVAHLIKCL TD +RGF+S+PERVF V++GLF+DYGL+HIY EDLE LQ+MLGVLD LIE  LPRLH HF+ Q
Sbjct: 1959 GLDYVVAHLIKCLGTDCHRGFASDPERVFRVILGLFRDYGLEHIYSEDLETLQLMLGVLDHLIETRLPRLHEHFREQ 2035          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: D8LIK8_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK8_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 4.510e-31
Identity = 57/77 (74.03%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 GLDYVVAHLIKCLNTDANRGFSSNPERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            GLDYVVAHLIKCL TD +RGF+S+P+RVF V++GLF+DYGL+HIY EDLE LQ+MLGVLD LIE  LPRLH+HF+ Q
Sbjct: 1660 GLDYVVAHLIKCLGTDCHRGFASDPDRVFRVILGLFRDYGLEHIYSEDLETLQLMLGVLDHLIETRLPRLHKHFREQ 1736          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A820U3L4_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820U3L4_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 1.110e-5
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   26 ERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            E  F+VL+ + QDY ++ +Y  D+  L + +  L+ LI+EYLP L+RHFQA+
Sbjct:  200 EEAFAVLVSIMQDYTMREMYKPDMYHLGLCMYQLECLIQEYLPDLYRHFQAE 251          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A817RRT4_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817RRT4_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 1.220e-5
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   26 ERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            E  F+VL+ + QDY ++ +Y  D+  L + +  L+ LI+EYLP L+RHFQA+
Sbjct:  200 EEAFAVLVSIMQDYTMREMYKPDMYHLGLCMYQLECLIQEYLPDLYRHFQAE 251          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A817HP94_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817HP94_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 1.250e-5
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   26 ERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            E  F+VL+ + QDY ++ +Y  D+  L + +  L+ LI+EYLP L+RHFQA+
Sbjct:  200 EEAFAVLVSIMQDYTMREMYKPDMYHLGLCMYQLECLIQEYLPDLYRHFQAE 251          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A820VVR3_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A820VVR3_9BILA)

HSP 1 Score: 50.4 bits (119), Expect = 2.160e-5
Identity = 21/52 (40.38%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   26 ERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            E  F+VL+ + QDY ++ +Y  D+  L + +  L+ +I+E+LP L+RHFQA+
Sbjct:  202 EEAFAVLVSIMQDYSMRKMYKSDMYHLALHMYQLEYMIQEFLPELYRHFQAE 253          
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Match: A0A815QZE9_9BILA (Hypothetical protein n=21 Tax=Rotaria TaxID=231623 RepID=A0A815QZE9_9BILA)

HSP 1 Score: 49.3 bits (116), Expect = 5.920e-5
Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   26 ERVFSVLIGLFQDYGLQHIYCEDLEALQVMLGVLDLLIEEYLPRLHRHFQAQ 77
            E  F+VL+ + QDY ++ +Y  D+  L + +  L+ +I+E+LP L RHFQA+
Sbjct:  223 EEAFAVLVSIMQDYSMREMYKSDMYHLALRMYQLEYMIQEFLPELCRHFQAE 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131951.2294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L5V9_9PHAE3.310e-3175.32Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D8LIK8_ECTSI4.510e-3174.03Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A820U3L4_9BILA1.110e-544.23Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A817RRT4_9BILA1.220e-544.23Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A817HP94_9BILA1.250e-544.23Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ... [more]
A0A820VVR3_9BILA2.160e-540.38Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
A0A815QZE9_9BILA5.920e-540.38Hypothetical protein n=21 Tax=Rotaria TaxID=231623... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 1..76
e-value: 3.3E-8
score: 33.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..77
score: 9.602
NoneNo IPR availableGENE3D1.10.472.80coord: 38..77
e-value: 1.3E-7
score: 33.4
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131951contigH-elongata_contig131951:168..785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131951.2294.1mRNA_H-elongata_contig131951.2294.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131951 168..785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131951.2294.1 ID=prot_H-elongata_contig131951.2294.1|Name=mRNA_H-elongata_contig131951.2294.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
GLDYVVAHLIKCLNTDANRGFSSNPERVFSVLIGLFQDYGLQHIYCEDLE
ALQVMLGVLDLLIEEYLPRLHRHFQAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf