prot_H-elongata_contig13164.2283.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13164.2283.1
Unique Nameprot_H-elongata_contig13164.2283.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
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BLAST of mRNA_H-elongata_contig13164.2283.1 vs. uniprot
Match: D8LJ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ22_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.680e-40
Identity = 89/157 (56.69%), Postives = 101/157 (64.33%), Query Frame = 0 
Query:    1 MRSVRGKFAKDMAPLHRAGLLWCERAAPSLLLAGESDHDSHAWSGKSAGADRTRGGLWRDCLAIVRNLALLNSNRSPVVVPSMVRIARAGSIDSQGDESTEVREVAALCDRTAVLEGEGVRSTLRLVAHPVNAPAAEMLGLLEALVLRAARSRAMYK 157
            MR VR KF KD APLHR GL+WCERAAP LLLA +S                  G LWRDCLAIVRNL LLN+ R+     S       G  D   +E+   +E AALCD T VL+GEG+RS LRL AHPVNAPA E+L LLE+LVLRAARSR M+K
Sbjct:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEG---------------GSLWRDCLAIVRNLTLLNNARA-----SGXXXXXXGP-DGSAEEAI-AKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSRVMHK 135
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BLAST of mRNA_H-elongata_contig13164.2283.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.650e-31
Identity = 80/150 (53.33%), Postives = 93/150 (62.00%), Query Frame = 0 
Query:   15 LHRAGLLWCERAAPSLLLAGESDHDSHAWSGKSAGADRTRGGLWRDCLAIVRNLALLNSNRSPVVVPSMVRIARAGSIDSQGDESTEVREVAALCDRTAVLEGEGVRSTLRLVAHPVNAPAAEMLGLLEALVLRAARSRAMYKAGSSSAT 164
            LHR  L+WCERAAP LLLA +S                  G LWRDCLAIVRNL LLN+ R+                D   +E+   +E AALCD T VL+GEG+RS LRL AHPVNAPA E+L LLE+LVLRAARSR M+KAGS  A+
Sbjct:  826 LHRLSLVWCERAAPPLLLADDSGEG---------------GSLWRDCLAIVRNLTLLNTARAS---GXXXXXXXXXGPDGSAEEAI-AKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSRVMHKAGSGGAS 956
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13164.2283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ22_ECTSI1.680e-4056.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I3_9PHAE2.650e-3153.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13164contigH-elongata_contig13164:3907..6608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13164.2283.1mRNA_H-elongata_contig13164.2283.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13164 3907..6608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13164.2283.1 ID=prot_H-elongata_contig13164.2283.1|Name=mRNA_H-elongata_contig13164.2283.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
MRSVRGKFAKDMAPLHRAGLLWCERAAPSLLLAGESDHDSHAWSGKSAGA
DRTRGGLWRDCLAIVRNLALLNSNRSPVVVPSMVRIARAGSIDSQGDEST
EVREVAALCDRTAVLEGEGVRSTLRLVAHPVNAPAAEMLGLLEALVLRAA
RSRAMYKAGSSSATSTAPYGFASAASGVGGSVATPLKRPRLAMMTSPSSA
SPPPGRAAHLGGGGGSGGIGNARSGVASTAAGSSGSMVASAGGMSASMML
SITNGDVEKGILTGVRGK*
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