prot_H-elongata_contig131588.2280.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131588.2280.1
Unique Nameprot_H-elongata_contig131588.2280.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
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BLAST of mRNA_H-elongata_contig131588.2280.1 vs. uniprot
Match: D8LBZ1_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ1_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 4.740e-89
Identity = 158/222 (71.17%), Postives = 171/222 (77.03%), Query Frame = 0 
Query:    1 DIVRLSPSQATGVLGLPENEHLNAFFSGFGACTQIVQEASDEIRGAMIHILSEGQFGMPDVEGKSFYSPPTPSPSC---PTKRAFGSGDQFANNDNPTDLPMIRLAGGGLGIPVGDPIEGSGSVDER---QRAQRARLSAGVACLWAGIGVGAMLCGHTAEATLHYAENAREAIKGCYDVVSEEVLRAFFCLAHMHSFREDFGKFSRYTAMAKNVAASLDRQ 216
            D+VRL+PS  TG LGL EN HLNAFFSGFG+CTQIVQE  DEIRGAMIH+LS+GQFGMP V+G+SFYSP T S S     T+R  G G++         L +IRL  GGLGI  G P    G   E+   QRAQRARLSAGVACLWAGIGVGAMLCG TAEAT  YAENAREAIKGCYDVVSEEVLRAF CLAHMHSFREDF KF RYTAMA +VAASLDRQ
Sbjct:  120 DVVRLTPSHGTGTLGLEENRHLNAFFSGFGSCTQIVQE--DEIRGAMIHVLSDGQFGMPSVDGESFYSPSTDSSSAGGTSTRRGIGVGEE-------PSLKLIRLEEGGLGIAAGTPAGAGGGESEKDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEVLRAFLCLAHMHSFREDFTKFFRYTAMANDVAASLDRQ 332
[Close]
BLAST of mRNA_H-elongata_contig131588.2280.1 vs. uniprot
Match: A0A6H5JQB9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB9_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.190e-66
Identity = 128/179 (71.51%), Postives = 135/179 (75.42%), Query Frame = 0 
Query:   41 DEIRGAMIHILSEGQFGMPDVEGKSFYSPPTPSPSCPTKRAFGSGDQFANNDNPTDLPMIRLAGGGLGIPVGDPIEGSGSVDER---QRAQRARLSAGVACLWAGIGVGAMLCGHTAEATLHYAENAREAIKGCYDVVSEEVLRAFFCLAHMHSFREDFGKFSRYTAMAKNVAASLDRQ 216
            DEIRGAMIH+LS GQFGMP V+G+SFYSP T S S     + GSG       +   L +IRL  GGLGI  G P    G   ER   QRAQRARLSAGVACLWAGIGVGAMLCG TAEAT  YAENAREAIKGCYDVVSEEVLRAF CLAHMHSFREDF KF RYTAMA +VAASLDRQ
Sbjct:  105 DEIRGAMIHVLSYGQFGMPSVDGESFYSPSTDS-STAGGTSTGSGSGVGEEPS---LKLIRLKEGGLGIAAGTPAGADGGGSERDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEVLRAFLCLAHMHSFREDFTKFFRYTAMANDVAASLDRQ 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131588.2280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBZ1_ECTSI4.740e-8971.17Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JQB9_9PHAE1.190e-6671.51Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131588contigH-elongata_contig131588:214..1562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131588.2280.1mRNA_H-elongata_contig131588.2280.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131588 214..1562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131588.2280.1 ID=prot_H-elongata_contig131588.2280.1|Name=mRNA_H-elongata_contig131588.2280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
DIVRLSPSQATGVLGLPENEHLNAFFSGFGACTQIVQEASDEIRGAMIHI
LSEGQFGMPDVEGKSFYSPPTPSPSCPTKRAFGSGDQFANNDNPTDLPMI
RLAGGGLGIPVGDPIEGSGSVDERQRAQRARLSAGVACLWAGIGVGAMLC
GHTAEATLHYAENAREAIKGCYDVVSEEVLRAFFCLAHMHSFREDFGKFS
RYTAMAKNVAASLDRQ
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