prot_H-elongata_contig131364.2262.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131364.2262.1
Unique Nameprot_H-elongata_contig131364.2262.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: D8LJM9_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM9_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.410e-54
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +P+      +S+TVKQICQWA NKKFTHLFVISERLK CNGLIVSV+P GPTAFFKVSNV+PS  VFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH
Sbjct:  118 IPNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 219          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A835YUA9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.670e-43
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 0
Query:   10 ESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +S TVKQ+CQW +NKKFTHLFV+SE+ K CNGL+V+V+P+GPTAFFKVSNV  SE + N G V+ HQPE+ILNNFNTRLGHRVGRFLGS FPH
Sbjct:  127 KSATVKQLCQWCNNKKFTHLFVLSEKSKVCNGLLVAVLPAGPTAFFKVSNVKTSEDIHNRGTVSPHQPELILNNFNTRLGHRVGRFLGSVFPH 219          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A6G0XIW8_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIW8_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.060e-37
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            VP+       +Y +K IC++A NK FTH+ ++SE+ KKCNG+++S +P GPTAFFK+SNVV  + + NH + T+HQPE+ILNNFNTRLGHR+GRFLGSFF H
Sbjct:  157 VPNSFYYKRGTYDIKDICRFAGNKAFTHVGILSEKEKKCNGMVISRLPHGPTAFFKISNVVLMDKIENHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEH 258          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A485L3X9_9STRA (Aste57867_15808 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3X9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.340e-37
Identity = 60/102 (58.82%), Postives = 79/102 (77.45%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            VP+       +Y +K IC++A NK FTH+ ++SE+ K CNG+I+S +P GPTAFFK+SNVV  + + NH + T+HQPE+ILNNFNTRLGHR+GRFLGSFF H
Sbjct:  160 VPNSFYYKRGTYDIKDICRFAGNKAFTHVGILSEKEKACNGMIISRLPHGPTAFFKISNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEH 261          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A4D9CX49_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX49_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.570e-37
Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +P+      +S+ VK IC+ A    FTH+F++SE+ K CNGL+VS +P GPT FFKVSNV P   + +HG+ TAH PE+ILNNFNTRLGHRVGRFLGSFFPH
Sbjct:  119 IPNAFFYPRKSFEVKAICKHAEESGFTHVFILSEKYKVCNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPH 220          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: W4GD54_9STRA (Brix domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD54_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.200e-37
Identity = 59/102 (57.84%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            VP+       +Y +K IC++A NK+FTH+ ++SE+ K CNGL++S +P GPTA+FK+SNVV  + + NH + T+HQPE+ILNNFNTRLGHR+GRFLGSFF H
Sbjct:  182 VPNSFYYKRGTYDIKDICKFAGNKEFTHVGILSEKEKTCNGLVISRLPHGPTAYFKISNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEH 283          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A1V9ZXE8_9STRA (Ribosome production factor 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXE8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.300e-36
Identity = 58/102 (56.86%), Postives = 82/102 (80.39%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +P+      ++Y +K IC++ASNK+F+H+ ++SE+ KK NG+I+S +P GPTA+FK+SNVV ++ + NH K T HQPE+ILNNFNTRLGHR+GRFLGSF+ H
Sbjct:  150 IPNSFYYERKTYDIKDICRFASNKEFSHVCILSEKEKKVNGMIISRLPHGPTAYFKISNVVLNDKIQNHAKRTNHQPELILNNFNTRLGHRIGRFLGSFYEH 251          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A024U7E5_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7E5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.500e-36
Identity = 60/102 (58.82%), Postives = 79/102 (77.45%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            VP+       +Y +K IC++A NK+FTH+ ++SE+ K  NGL++S +P GPTAFFKVSNVV  + + NH + T+HQPE+ILNNFNTRLGHR+GRFLGSFF H
Sbjct:  158 VPNSFYYKRGTYDIKDICKFAGNKEFTHVGILSEKEKVVNGLVISRLPHGPTAFFKVSNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEH 259          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: A0A067C2S8_SAPPC (Brix domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C2S8_SAPPC)

HSP 1 Score: 133 bits (334), Expect = 9.570e-36
Identity = 59/102 (57.84%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +P+    + ++Y +K IC++A NK FTH+ ++SE+ KK NG++VS +P GPTAFFK+SNVV +  + N  K T+HQPE+ILNNFNTRLGHR+GRFLGSFF H
Sbjct:  157 IPNSFYYDRKTYDIKDICRFAGNKAFTHVCILSEKEKKVNGMVVSRLPHGPTAFFKISNVVLNNKIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEH 258          
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Match: K3XB40_GLOUD (Brix domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB40_GLOUD)

HSP 1 Score: 130 bits (327), Expect = 9.070e-35
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSGPTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPH 102
            +P+       ++ +K+I Q+A+NK+FTHL V+SE+ K CNG++VS +P GPTAFFKV+NV  +E + +HGK T HQPE+ILNNF+TRLGHRVGRFLGS F H
Sbjct:  150 IPNSFYYKRGTFDIKEIVQFATNKEFTHLIVLSEKSKVCNGMLVSRLPEGPTAFFKVTNVKLNEDIKDHGKRTNHQPELILNNFSTRLGHRVGRFLGSLFRH 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131364.2262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM9_ECTSI2.410e-5483.33Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YUA9_9STRA3.670e-4374.19Anticodon-binding protein n=1 Tax=Tribonema minus ... [more]
A0A6G0XIW8_9STRA2.060e-3758.82Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A485L3X9_9STRA3.340e-3758.82Aste57867_15808 protein n=1 Tax=Aphanomyces stella... [more]
A0A4D9CX49_9STRA3.570e-3760.78Brix domain-containing protein n=2 Tax=Monodopsida... [more]
W4GD54_9STRA5.200e-3757.84Brix domain-containing protein n=7 Tax=Aphanomyces... [more]
A0A1V9ZXE8_9STRA2.300e-3656.86Ribosome production factor 1 (Fragment) n=1 Tax=Th... [more]
A0A024U7E5_9STRA3.500e-3658.82Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A067C2S8_SAPPC9.570e-3657.84Brix domain-containing protein n=4 Tax=Saprolegnia... [more]
K3XB40_GLOUD9.070e-3558.82Brix domain-containing protein n=1 Tax=Globisporan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainPFAMPF04427Brixcoord: 11..101
e-value: 5.1E-11
score: 43.0
IPR007109Brix domainPROSITEPS50833BRIXcoord: 1..102
score: 15.845
NoneNo IPR availablePANTHERPTHR22734:SF3RIBOSOME PRODUCTION FACTOR 1coord: 10..102
NoneNo IPR availablePANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 10..102
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131364contigH-elongata_contig131364:984..1753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131364.2262.1mRNA_H-elongata_contig131364.2262.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131364 984..1753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131364.2262.1 ID=prot_H-elongata_contig131364.2262.1|Name=mRNA_H-elongata_contig131364.2262.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
VPSPLCNNPESYTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVIPSG
PTAFFKVSNVVPSEAVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFF
PH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix