prot_H-elongata_contig131033.2244.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131033.2244.1
Unique Nameprot_H-elongata_contig131033.2244.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A1V9X0W5_9ACAR (Arf-GAP with coiled-coil n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9X0W5_9ACAR)

HSP 1 Score: 88.2 bits (217), Expect = 6.090e-19
Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    1 MAAASAKRLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRARRVFS 60
            + ++SA R +P NERCVDC ARDP+WAS++LG  +CI+CSGIHRS+GVH+SKVR+ ++ S
Sbjct:  266 LTSSSALRTVPGNERCVDCGARDPEWASVNLGATLCIQCSGIHRSLGVHISKVRSLKLDS 325          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A812REU2_SYMMI (AGD3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812REU2_SYMMI)

HSP 1 Score: 80.5 bits (197), Expect = 3.150e-17
Identity = 32/48 (66.67%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    8 RLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            R +P N+RCVDC A  PDWASI+LGV+MC++CSG+HRS+G H+SKVR+
Sbjct:   12 RRVPGNDRCVDCGAEAPDWASINLGVLMCLQCSGVHRSLGTHISKVRS 59          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.510e-17
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    9 LLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            L   N  CVDC AR+PDW+SI+LGVMMCIECSGIHRSMGVHVSKVR+
Sbjct:  440 LWEANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRS 486          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A0D2U686_CAPO3 (Development and differentiation enhancing factor 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U686_CAPO3)

HSP 1 Score: 83.2 bits (204), Expect = 3.530e-17
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    8 RLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            R LP N RCVDC A DP+WAS++LG+MMCI+CSG+HR +GVH+SKVR+
Sbjct:  434 RALPGNNRCVDCDAADPEWASLNLGIMMCIDCSGVHRELGVHISKVRS 481          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.830e-17
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 MAAASAKRLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            M+  +  RL   N +CVDC A  PDWASISLGV+MCIECSGIHRSMGVH+SKVR+
Sbjct:  922 MSPLALTRLSKANPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKVRS 976          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A8H7UGP7_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UGP7_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 6.570e-17
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    8 RLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            R +P N  C DCRA DPDWASI+LG ++CIECSGIHRS+GVHVSKVR+
Sbjct:  455 RSMPGNNFCADCRAADPDWASINLGTLLCIECSGIHRSLGVHVSKVRS 502          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.590e-17
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
Query:   13 NERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            N  CVDC AR+PDW+SI+LGVMMCIECSGIHRSMGVHVSKVR+
Sbjct:  704 NPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRS 746          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A7R9TFM5_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TFM5_MICPS)

HSP 1 Score: 78.2 bits (191), Expect = 8.960e-17
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    8 RLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            R  P N+ C DC ARDPDWAS++LGV++CI CSG HR +GVHVSKVR+
Sbjct:   77 RAAPGNDHCADCGARDPDWASLNLGVLLCITCSGAHRQLGVHVSKVRS 124          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A067JFB9_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JFB9_JATCU)

HSP 1 Score: 82.0 bits (201), Expect = 8.970e-17
Identity = 33/48 (68.75%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    8 RLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRA 55
            R +P N++CVDC A +PDWAS++LGV+MCIECSG+HR++GVHVSKVR+
Sbjct:  500 RRVPGNDKCVDCGAPEPDWASLNLGVLMCIECSGVHRNLGVHVSKVRS 547          
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Match: A0A1E7FKS9_9STRA (Arf GTPase activating protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKS9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.500e-17
Identity = 30/48 (62.50%), Postives = 41/48 (85.42%), Query Frame = 0
Query:   13 NERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHVSKVRARRVFS 60
            N  CVDC A +PDW S++LG++MCI+CSG+HRS+GVHVSKVR+ ++ S
Sbjct:    4 NSTCVDCGAPNPDWVSLNLGILMCIDCSGVHRSLGVHVSKVRSLKLDS 51          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131033.2244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9X0W5_9ACAR6.090e-1961.67Arf-GAP with coiled-coil n=1 Tax=Tropilaelaps merc... [more]
A0A812REU2_SYMMI3.150e-1766.67AGD3 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
D7FVG0_ECTSI3.510e-1778.72Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpu... [more]
A0A0D2U686_CAPO33.530e-1768.75Development and differentiation enhancing factor 2... [more]
A0A835ZCL2_9STRA4.830e-1769.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8H7UGP7_9FUNG6.570e-1772.92Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A6H5L2J8_9PHAE6.590e-1783.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9TFM5_MICPS8.960e-1766.67Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A067JFB9_JATCU8.970e-1768.75Uncharacterized protein n=2 Tax=Jatropha curcas Ta... [more]
A0A1E7FKS9_9STRA9.500e-1762.50Arf GTPase activating protein (Fragment) n=1 Tax=F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 32..49
score: 56.13
coord: 13..32
score: 48.1
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 4..59
e-value: 0.0015
score: -0.9
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 10..55
e-value: 3.6E-21
score: 75.4
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..60
score: 18.688
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 2..58
e-value: 2.1E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR45819:SF5CENTAURIN-GAMMA-1Acoord: 8..55
NoneNo IPR availablePANTHERPTHR45819FAMILY NOT NAMEDcoord: 8..55
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 9..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131033contigH-elongata_contig131033:971..1799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131033.2244.1mRNA_H-elongata_contig131033.2244.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131033 953..1799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131033.2244.1 ID=prot_H-elongata_contig131033.2244.1|Name=mRNA_H-elongata_contig131033.2244.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MAAASAKRLLPRNERCVDCRARDPDWASISLGVMMCIECSGIHRSMGVHV
SKVRARRVFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO