prot_H-elongata_contig131025.2242.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131025.2242.1
Unique Nameprot_H-elongata_contig131025.2242.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.950e-17
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:  106 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 198          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.370e-17
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:   42 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 134          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.060e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:  249 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 341          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5K1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.290e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:  502 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 594          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.400e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:  962 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1054          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.430e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct: 1341 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1433          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.440e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct: 1361 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1453          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.440e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R  +A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct: 1504 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1596          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 6.160e-16
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR 100
            +G+ + + GC I R   A  L+I Q  Y++SMVE FDVK  S+IPAT G     K        E EE  ++P +EA+G++MW +T +RPD++ AVRAVAR
Sbjct:  597 LGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 689          
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 8.520e-16
Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    1 MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGVPTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVARF 101
            +GD R Y GC   R R A  LKI Q  Y E +   F V+ G +IP   G+  LS+ D+       EE+  +P++E +G+LMW AT TRPD+A+AVRAVAR+
Sbjct:  611 LGDLRWYSGCFYERDRDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARY 704          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131025.2242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE2.950e-1745.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE6.370e-1745.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE3.060e-1645.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1T2_9PHAE3.290e-1645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE3.400e-1645.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.430e-1645.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.440e-1645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.440e-1645.00Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K164_9PHAE6.160e-1645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0C9_9PHAE8.520e-1645.54Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131025contigH-elongata_contig131025:117..419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131025.2242.1mRNA_H-elongata_contig131025.2242.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131025 102..419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131025.2242.1 ID=prot_H-elongata_contig131025.2242.1|Name=mRNA_H-elongata_contig131025.2242.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MGDARCYMGCHITRSRKARELKIDQHLYVESMVETFDVKKGSKIPATSGV
PTLSKADEPRNPEEKEEMRKFPYQEAVGALMWTATMTRPDMASAVRAVAR
F
back to top