prot_H-elongata_contig130993.2240.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130993.2240.1
Unique Nameprot_H-elongata_contig130993.2240.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: D7G5X2_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 7.780e-15
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD+++F  ++PVYGLVFLFKWTG+ D+R T E+  +P LFFARQV
Sbjct:   17 ELYSLDESNFKDIRPVYGLVFLFKWTGD-DERHTTESQDEPGLFFARQV 64          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A6H5KR90_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR90_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 7.350e-14
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD+++F  V+PVYGLVFLFKWTG+ D+R T E  ++P LFFARQV
Sbjct:    4 ELYSLDESNFKDVRPVYGLVFLFKWTGD-DERHTTEPQNEPGLFFARQV 51          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A8J2SRA1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRA1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.500e-13
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLDDA  A++QPV+GL+FLFKWTGE+DDR   +    P LFFA+QV
Sbjct:   29 ELYSLDDAELAQLQPVFGLIFLFKWTGEKDDRPCCD--EVPGLFFAKQV 75          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A7S1XK40_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK40_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.080e-12
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 ELYSLDDASFARVQ-PVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD  SF R++ PVYGLVFLFKW  E DDR T      P LFFA+QV
Sbjct:   31 ELYSLDPDSFERLEKPVYGLVFLFKWQREADDRPTVADGEVPGLFFAKQV 80          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: F0YGW3_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW3_AURAN)

HSP 1 Score: 67.4 bits (163), Expect = 5.410e-12
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEAS-SQPSLFFARQV 49
            ELYSLDD   AR  PV+GL+FLFKWTGE+DDR T     + P LF+A+Q+
Sbjct:   29 ELYSLDDGELARHAPVFGLIFLFKWTGEKDDRATLSFDEAPPGLFYAKQM 78          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A835YVG3_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.140e-11
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD+ SFA +  +YGL+FLFKW  E D+R T +A + P LFF+ QV
Sbjct:   31 ELYSLDEGSFADLGDIYGLIFLFKWRKETDNRPTLDAMNLPDLFFSHQV 79          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A485K8S6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8S6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.780e-10
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQ---PSLFFARQV 49
            ELYSLDDASF ++ P++GL+FLFKWT       T+ AS+    P LFFA+QV
Sbjct:   29 ELYSLDDASFQQIAPIFGLIFLFKWTPGHAPAPTSSASAHQISPDLFFAKQV 80          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A6G0WB30_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB30_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.180e-10
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWT-GERDDRTTAEASSQPSLFFARQV 49
            ELYSLD+ASF ++ PV+GL+FLFKWT G     TT+     P LFFA+QV
Sbjct:   29 ELYSLDEASFQQIAPVFGLIFLFKWTPGHAPAPTTSTHVVSPDLFFAKQV 78          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A446WT88_TRITD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446WT88_TRITD)

HSP 1 Score: 60.1 bits (144), Expect = 2.480e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD  S +++QPVYGL+FLFKW    +D     +   P+LFFARQV
Sbjct:   29 ELYSLDVDSLSQLQPVYGLIFLFKWMPGGNDERPVVSDPNPNLFFARQV 77          
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Match: A0A453Q453_AEGTS (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453Q453_AEGTS)

HSP 1 Score: 60.1 bits (144), Expect = 2.690e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    1 ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV 49
            ELYSLD  S +++QPVYGL+FLFKW    +D     +   P+LFFARQV
Sbjct:   46 ELYSLDVDSLSQLQPVYGLIFLFKWMPGGNDERPVVSDPNPNLFFARQV 94          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130993.2240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5X2_ECTSI7.780e-1565.31Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR90_9PHAE7.350e-1467.35Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A8J2SRA1_9STRA1.500e-1365.31Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pela... [more]
A0A7S1XK40_9STRA3.080e-1264.00Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
F0YGW3_AURAN5.410e-1260.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aure... [more]
A0A835YVG3_9STRA6.140e-1157.14Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A485K8S6_9STRA2.780e-1055.77Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
A0A6G0WB30_9STRA7.180e-1058.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
A0A446WT88_TRITD2.480e-955.10Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trit... [more]
A0A453Q453_AEGTS2.690e-955.10Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aegi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyGENE3D3.40.532.10coord: 1..49
e-value: 1.2E-10
score: 43.2
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePFAMPF01088Peptidase_C12coord: 1..49
e-value: 7.2E-9
score: 35.7
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePANTHERPTHR10589UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 1..49
NoneNo IPR availablePANTHERPTHR10589:SF16UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5coord: 1..49
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130993contigH-elongata_contig130993:1578..1727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130993.2240.1mRNA_H-elongata_contig130993.2240.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130993 1578..1727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130993.2240.1 ID=prot_H-elongata_contig130993.2240.1|Name=mRNA_H-elongata_contig130993.2240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
ELYSLDDASFARVQPVYGLVFLFKWTGERDDRTTAEASSQPSLFFARQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036959Peptidase_C12_UCH_sf
IPR001578Peptidase_C12_UCH
IPR038765Papain-like_cys_pep_sf