prot_H-elongata_contig130887.2233.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130887.2233.1
Unique Nameprot_H-elongata_contig130887.2233.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
BLAST of mRNA_H-elongata_contig130887.2233.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 6.810e-51
Identity = 88/131 (67.18%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    1 MTLEMEAIETSLAKLSPSGWKPGVTYDPVADKELMEDDRIEAQKREERNKKSGFFSYVKMVFGAKWADSKSLRKIPSTDVGIFERCKKEAGFVPYYIRKMQHPAAKKAFAFGFLLRLNQGSDEVSTSLKQV 131
            MTLEMEAIETSL KL+PSGW P   YD  AD ELM++DR EA KRE+R K SGFF +VKM+FG K AD++SL+KIP++D  +F +CKK+ GFVPYYIR+MQH  AKKA +FGFLLRL QGSDEV   LKQ+
Sbjct:  220 MTLEMEAIETSLQKLAPSGWVPNDAYDKDADVELMKEDREEAVKREKRKKSSGFFGFVKMIFGGKMADNRSLKKIPTSDSALFSQCKKDGGFVPYYIRQMQHANAKKALSFGFLLRLCQGSDEVPVQLKQL 350          
BLAST of mRNA_H-elongata_contig130887.2233.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.710e-27
Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    1 MTLEMEAIETSLAKLSPSGWKPGVTYDPVADKELMEDDRIEAQKREERNKKS-GFFSYVKMVFGAKWADSKSLRKIPSTDVGIFERCKKEAGFVPYYI---RKMQHPAAKKAFAFGFLLRLNQGSDEVSTSLKQ 130
            MTLE+E +ET    L+ SGW  G+++DP  D+ELME+DR  A++REER K++ G F+++KM+ GAK ADS SL+  P+++  + + C + AGF PYY+    K +   A+ A  + F  RL QGS+EV  + KQ
Sbjct:  157 MTLELEPLETGNKHLAESGWTAGISFDPEGDEELMEEDRAMAERREERKKQACGGFTFLKMLVGAKMADSASLKGTPTSEKNVKQLCTERAGFAPYYLVGEEKSKMANARNALVWAFTRRLCQGSEEVPAATKQ 290          
BLAST of mRNA_H-elongata_contig130887.2233.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.660e-9
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 MTLEMEAIETSLAKLSPSGWKPGVTYDPVADKELMEDDRIEAQKREERNKKS--GFFSYVKMVFGAKWA 67
            MTLE+E +ET    L+ SGW  G+++DP  D+ELME+DR+ A++REER K++  GF S    +  A +A
Sbjct:   48 MTLELEPLETGNEHLAESGWTAGISFDPEGDEELMEEDRVMAERREERKKQACGGFTSADNTILRAHFA 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130887.2233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE6.810e-5167.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXG8_9PHAE1.710e-2744.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5G2_ECTSI4.660e-946.38Probable fusion protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130887contigH-elongata_contig130887:146..1393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130887.2233.1mRNA_H-elongata_contig130887.2233.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130887 146..1405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130887.2233.1 ID=prot_H-elongata_contig130887.2233.1|Name=mRNA_H-elongata_contig130887.2233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
MTLEMEAIETSLAKLSPSGWKPGVTYDPVADKELMEDDRIEAQKREERNK
KSGFFSYVKMVFGAKWADSKSLRKIPSTDVGIFERCKKEAGFVPYYIRKM
QHPAAKKAFAFGFLLRLNQGSDEVSTSLKQV
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