prot_H-elongata_contig130418.2209.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130418.2209.1
Unique Nameprot_H-elongata_contig130418.2209.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
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BLAST of mRNA_H-elongata_contig130418.2209.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.540e-20
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:   20 LFHSFAKLRDEEASQKAELKSRCVVCGISRNEFDRGGNVFFDHTTNDHCM 69
            +  SFA+LRDEEA+ K ELKSRCVVCGISRNEFDRGGNVF+DH T+DHCM
Sbjct: 4219 ILDSFAQLRDEEAALKDELKSRCVVCGISRNEFDRGGNVFYDHVTHDHCM 4268
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BLAST of mRNA_H-elongata_contig130418.2209.1 vs. uniprot
Match: A0A6H5L609_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L609_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.560e-19
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0 
Query:   20 LFHSFAKLRDEEASQKAELKSRCVVCGISRNEFDRGGNVFFDHTTNDHCM 69
            +  SFA+LRDEEA+   ELKSRCVVCGISRNEFDRGGNVF+DH T+DHCM
Sbjct: 1168 ILDSFAQLRDEEAALTDELKSRCVVCGISRNEFDRGGNVFYDHVTHDHCM 1217
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130418.2209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMW8_ECTSI5.540e-2080.00Inositol triphosphate receptor (IP3R)/ Ryanodine r... [more]
A0A6H5L609_9PHAE3.560e-1978.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130418contigH-elongata_contig130418:1041..1250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130418.2209.1mRNA_H-elongata_contig130418.2209.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130418 1041..1250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130418.2209.1 ID=prot_H-elongata_contig130418.2209.1|Name=mRNA_H-elongata_contig130418.2209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
DLNELWVFFKKKRKKLLNSLFHSFAKLRDEEASQKAELKSRCVVCGISRN
EFDRGGNVFFDHTTNDHCM*
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