prot_H-elongata_contig130406.2208.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130406.2208.1
Unique Nameprot_H-elongata_contig130406.2208.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
BLAST of mRNA_H-elongata_contig130406.2208.1 vs. uniprot
Match: D7FPJ6_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ6_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.180e-15
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    2 VRRVFGTSYLTASQITLRASARIAKVFFQSEQFSDYELPGHLRVI 46
            VR VFG+SYLT SQ+T+RASAR+AK+FFQS+ FSDYELP HLRV+
Sbjct:  264 VRLVFGSSYLTTSQVTVRASARVAKLFFQSQPFSDYELPSHLRVV 308          
BLAST of mRNA_H-elongata_contig130406.2208.1 vs. uniprot
Match: A0A7S1TVV2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV2_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.050e-6
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    1 MVRRVFGTSYLTASQITLRASARIAKVFFQSEQFSDYELPGHLRVI 46
            +  + FG+ YLT  Q+ +R S  ++K FFQ   +SD ELP HLRV+
Sbjct:  142 LTAKAFGSKYLTTYQVRVRGSVCVSKAFFQGHDYSDAELPSHLRVL 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130406.2208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPJ6_ECTSI4.180e-1575.56DUF667 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S1TVV2_9STRA1.050e-645.65Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007714CFA20 domainPFAMPF05018DUF667coord: 2..45
e-value: 4.3E-6
score: 26.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130406contigH-elongata_contig130406:1034..1180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130406.2208.1mRNA_H-elongata_contig130406.2208.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130406 78..1180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130406.2208.1 ID=prot_H-elongata_contig130406.2208.1|Name=mRNA_H-elongata_contig130406.2208.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MVRRVFGTSYLTASQITLRASARIAKVFFQSEQFSDYELPGHLRVIDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007714CFA20_dom