prot_H-elongata_contig130357.2206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130357.2206.1
Unique Nameprot_H-elongata_contig130357.2206.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.960e-39
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 0
Query:    1 QVRNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYRCVHASRRV 96
            Q+R+ +L G+ V VVQYPT+ HD+KDM PDD+R+VEGSASSIIAVSYEAR FGVKR MK G+ARKVCPEL+LVQVPTRN KADISLYR  HA  RV
Sbjct:   60 QLRDAALTGRPVVVVQYPTSNHDIKDMEPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYR--HAGERV 153          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 3.120e-37
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0
Query:    1 QVRNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYRCVHASRRV 96
            Q+R+ +L G+ V VVQYPT+ HD+KDM PDD+R+VEGSASSIIAVSYEAR FGVKR MK G+ARKVCPELSLVQVPTRN KADIS YR  HA  RV
Sbjct:   60 QLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYR--HAGERV 153          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A7S3H017_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H017_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.880e-25
Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    4 NPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            NPSL GKAV V QY     D+K   P+D+RIV  ++ S+IAVSYEARA GVKR M+G EA+KVCPE+ LVQVPT + KAD+++YR
Sbjct:   42 NPSLKGKAVGVAQY-NPFGDLKSFAPEDNRIV--NSGSLIAVSYEARARGVKRNMRGAEAKKVCPEMLLVQVPTSHGKADLTIYR 123          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A7S1NH26_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NH26_9EUGL)

HSP 1 Score: 102 bits (253), Expect = 2.220e-23
Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    3 RNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            R+PSL G+ +AVVQY     D++ + P + RI   S  S+IAVSYEARAFGVKR M+G EAR+ CPEL LVQVPT N KAD+++YR
Sbjct:   37 RDPSLQGQPIAVVQY-NPFGDLRTILPSEPRIFNDSNGSLIAVSYEARAFGVKRNMRGDEARRQCPELQLVQVPTANGKADLTIYR 121          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A5J4XRP8_9CHLO (DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRP8_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 4.280e-23
Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    3 RNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            RNP L GK V  VQY     D++ +TPD+ RI   S  S+IAVSYEARA GVKR M+G +ARKVCPE+ LVQVPT + KAD+++YR
Sbjct:   26 RNPDLKGKPVVTVQY-NPFGDLRTITPDEPRIFNDSNGSLIAVSYEARASGVKRGMRGDQARKVCPEVQLVQVPTAHGKADLTVYR 110          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A1D2AE22_AUXPR (UmuC domain-containing protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AE22_AUXPR)

HSP 1 Score: 97.4 bits (241), Expect = 5.390e-23
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    3 RNPS-LAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYRCVHASRRV 96
            R+P+ LAGK +AVVQY     D++ + P+DDR++  S +SIIAVSYEARA GV+R M+G EA  +CP+L LVQVPT + KAD++LYR   A RRV
Sbjct:   60 RDPNRLAGKPLAVVQY-NPQGDLRTLLPEDDRVIPASPNSIIAVSYEARAQGVRRNMRGDEACALCPDLILVQVPTAHGKADLTLYRA--AGRRV 151          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A2K3D4A8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D4A8_CHLRE)

HSP 1 Score: 99.8 bits (247), Expect = 2.340e-22
Identity = 55/88 (62.50%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    3 RNPSLAGKAVAVVQY-PTTMHDMKD-MTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            RNPSL G+ VAVVQY P     +K  + PDD RI   S  SIIAVSYEAR FGVKR M G EARK CP L LVQVPT + KAD+++YR
Sbjct:   35 RNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSIIAVSYEARKFGVKRNMSGQEARKACPTLQLVQVPTAHGKADLTIYR 122          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A2P6TXE9_CHLSO (DNA polymerase eta isoform C n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXE9_CHLSO)

HSP 1 Score: 99.4 bits (246), Expect = 3.220e-22
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 QVRNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            Q RNPSL GK V VVQY      ++   PD++R++  S  S+IAVSYEARA GVKR M+G +ARK CP++ LVQVPT + KAD++LYR
Sbjct: 1918 QQRNPSLRGKPVGVVQY-NPYGSLETRGPDENRLMNDSNGSLIAVSYEARAHGVKRNMRGDDARKACPDIQLVQVPTAHGKADLTLYR 2004          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: L1JQL2_GUITC (UmuC domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQL2_GUITC)

HSP 1 Score: 97.1 bits (240), Expect = 4.500e-22
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 QVRNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            Q R+ SL GK VAV+QY     D++D+ PD++R  + S  S+IAVSYEARA GVKRIM+G EAR+ CP+L L+QVP  + K+DI+LYR
Sbjct:   19 QRRDESLRGKPVAVIQY-NPNGDLQDVRPDENRRCDHSDGSLIAVSYEARAKGVKRIMRGKEARQACPDLILIQVPVAHKKSDINLYR 105          
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Match: A0A835Y9U0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9U0_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 1.100e-21
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 QVRNPSLAGKAVAVVQY-PTTMHDMKD-MTPDDDRIVEGSASSIIAVSYEARAFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYR 88
            Q RNP+L G+ VAVVQY P     +K  + P+D+RI+  S  SIIAVSYEAR FGVKR M G +ARK+CP L LVQVPT + KAD+++YR
Sbjct:   29 QRRNPALRGQPVAVVQYNPWDTEALKTALRPEDNRILNDSNGSIIAVSYEARKFGVKRNMMGQQARKLCPTLQLVQVPTAHGKADLTIYR 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130357.2206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJJ9_9PHAE1.960e-3975.00UmuC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FT49_ECTSI3.120e-3775.00Translesion synthesis DNA polymerase eta splice va... [more]
A0A7S3H017_9STRA5.880e-2561.18Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1NH26_9EUGL2.220e-2359.30Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A5J4XRP8_9CHLO4.280e-2359.30DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A1D2AE22_AUXPR5.390e-2356.84UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2K3D4A8_CHLRE2.340e-2262.50Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A2P6TXE9_CHLSO3.220e-2256.82DNA polymerase eta isoform C n=3 Tax=Chlorella sor... [more]
L1JQL2_GUITC4.500e-2256.82UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835Y9U0_9CHLO1.100e-2158.89Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001126UmuC domainPFAMPF00817IMScoord: 1..91
e-value: 1.4E-15
score: 57.6
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..78
score: 12.496
NoneNo IPR availableGENE3D2.30.40.20coord: 1..80
e-value: 1.0E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR45873FAMILY NOT NAMEDcoord: 1..94
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130357contigH-elongata_contig130357:233..1000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130357.2206.1mRNA_H-elongata_contig130357.2206.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130357 233..1000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130357.2206.1 ID=prot_H-elongata_contig130357.2206.1|Name=mRNA_H-elongata_contig130357.2206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
QVRNPSLAGKAVAVVQYPTTMHDMKDMTPDDDRIVEGSASSIIAVSYEAR
AFGVKRIMKGGEARKVCPELSLVQVPTRNSKADISLYRCVHASRRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC